Gene PICST_33511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33511 
Symbol 
ID4840637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp837074 
End bp838024 
Gene Length951 bp 
Protein Length316 aa 
Translation table12 
GC content36% 
IMG OID640391952 
Productpredicted protein 
Protein accessionXP_001386352 
Protein GI150866683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTC TTAACGATTT AAGTACAAAC AAGCATTCGA AGAAGTCGAA AAAGATGACA 
AAAGATGAAA AAATGGTGGA CGCTACTGAT GCTGGTAATG GATCGGATTA CTGCTCAGAT
TCAGAGTCAT GGCTGGAGAC TGAAGAAGAA GAACTGCTGG ATGATGATGA CAATGAATTA
ATCGAAAGAA AAAGTGTACG ACATTTGGTA AGCACCGAAA TGATTGTCCA TAAGGAGAAA
CTTAAGAATT TGCCAGATTT GGACTGTAGT CCGAGAACTA TTAGCAAATA TAAGATGGTA
CTTGATGGAA TATTCGACAG ATTTCCAACA TTTAAAAAGA CTGTTCTTAA TGACTTCAAT
ATTGATTCAA TCAAGGATGT CACAATGCTA TTGGTTGCTT ACAATAAAGA AAGTACAATA
TTCTTCTACA GATATTTGGC CGATTCAATC GAACGCATAT TGATGACGAA AACTAGAGAT
ATCCGTAATG AATTGGGAAG ACCTACTTTG AAAGAAATAA ACCAATACAT TGAAGATCAT
TATGATGCTT CAGAAGAAAT CATTAATTAT TTCAAAGGAT TTAGAAAAAA TCGAAAGGTT
CTTAAATCAT CTGAACGCGA ACGTAATATT GAACGGTTAA TATCAACAAC CGATAAACAT
ATTGTCCTGT TCTTCAGAAC GTTGGAGCCT CATTATTTCC ATGAATACGC ATTGTTTATC
GACTATAGTA GTGAAGATAA TGTAGAAGTC TTGGGTCGAC AATTGAATGA ACAATTCCAG
GCATATAGAA AGGACCCTTC CAAAGGTGCG GCAAGTATGG AGCAAACTTA CATCAAAATG
CGCGATTACG CTGCATTCAC GGAGCCATCT AAAGTCAACA TCAATAAAAC GAAAAAGAAG
AGTAATCAAC ACGGTTTCAG GAAGAATCAA AGTGCAGAGT CTATTAACTG A
 
Protein sequence
MVTLNDLSTN KHSKKSKKMT KDEKMVDATD AGNGSDYCSD SESWSETEEE ESSDDDDNEL 
IERKSVRHLV STEMIVHKEK LKNLPDLDCS PRTISKYKMV LDGIFDRFPT FKKTVLNDFN
IDSIKDVTML LVAYNKESTI FFYRYLADSI ERILMTKTRD IRNELGRPTL KEINQYIEDH
YDASEEIINY FKGFRKNRKV LKSSERERNI ERLISTTDKH IVSFFRTLEP HYFHEYALFI
DYSSEDNVEV LGRQLNEQFQ AYRKDPSKGA ASMEQTYIKM RDYAAFTEPS KVNINKTKKK
SNQHGFRKNQ SAESIN