Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32905 |
Symbol | |
ID | 4840070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 928695 |
End bp | 930122 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391385 |
Product | predicted protein |
Protein accession | XP_001385537 |
Protein GI | 150866064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0302596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.166327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAG CAAAGAAGAC AACAGATTCA CTGTTGGAAC TGTTAATCAA GAGGGCTACT GATGAAACCT TGACAACCAA CAATTGGGAG TATATCATTG CTGTTTGCGA TAAGGTGAAG AGCGACCCAG AAGTGGCAAC TAAGAAAGCA ATTACCATCT TAACAACACG ATTACAGAGT AAAGATGCCA ATGTGTTGTT GAGAACGCTT TCCTTAATAA TTGCTCTTGG CGAGAACTGT GGATCACGAA TGCAGCAAGA AATTGCTTCG GAAGCATTCT TGAAGCCGTT AACCAAGAAG CTAAAGGAGA AAAAGTTGCA TGAAACGGTG AAGGTTGAAA TTGCCAAACT TATCGAACAA TTGCACCAGT CTTTTAAGTC TGATCCATCG TTGAAGCCAA TGTCAGATGC CTATAACAAG ATAAAACAGG AACACCCAAG ATACCTTGAA AGAAATGTAC CAGCTAAACC AGAGAAGCAT GATGTCAGCT CTAAAACACA ATCGGAAGAG GATGAATTGC AAAGGGTCAT CAACTTATCC TTACAGGAGT ACGAAAGAGA GCAGTTTTCG AAGAGTCTTC AGAAACCACT TCCAGATCCA AAAAAGACTT CTCCTAGAAA TGCAAACATC GCCCAAGAAG ACTCTGATGA CAAGAAGCCT GAAATAAGCA AGGTTAGAGC AATGTTCGAC TTGGTATCTC ACGAAAAAGA TGAACTTTCC TTCAGAAAGG GTGATCTAAT TAATGTGATT GAGGTTGTGT ACCGTGATTG GTGGCGTGGT TCATTGCCAA CTGGAGAAGT TGGAATATTT CCCTTGAATT ATGTTGCGCC TGTTTATGCA AAATCACTGG ATCAAATTGA AAAGGAATTA CAAATTGAAA ACAGATTGCT TAACGTGGAG CTGAAGAAGA TTGATAAAGT ATTGGCTATG TTGTCTGCAG CTACTAATGG CAACGAAAAC ATAGACGATG AAGAGTTGGA GAATTTATAC GGGCAGGTTA GTGGATTACG CTCACAGTTG GGCCATCTTA TCATGAAGCA TACCCAGAGA GAAAAGGAAT TGAAACTATT AAACGAACAG TTGGCAATTG AAGACAAAGC ATTCCATGAT TTGTTGGATA AACTGATATC GTCATTTAGT AATAGGAACT CTTACATTTC TCTGGATGTT GTTCCATATC CAACTGGAGG CAATGGTTCA GTCAACAGTG GATACCCCGC CGTGCCTAAT GCATACTCTG GTTACAATAC CTACAACGGC AATGGTACTC CTTTGGCCAT GCAACCAACG AGTCTCGGTT TCGGAAATTC TATTTATGCT CTGCAACCCC AGCAGCAGCC CCCACGACAA GTGAGTCAGC AAATGCCACC GCAAGATTAT CAACTGTATC TGAACATAAA TAGTTTCCCA GAGGTAGATA GAATGTAG
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Protein sequence | MYKAKKTTDS SLESLIKRAT DETLTTNNWE YIIAVCDKVK SDPEVATKKA ITILTTRLQS KDANVLLRTL SLIIALGENC GSRMQQEIAS EAFLKPLTKK LKEKKLHETV KVEIAKLIEQ LHQSFKSDPS LKPMSDAYNK IKQEHPRYLE RNVPAKPEKH DVSSKTQSEE DELQRVINLS LQEYEREQFS KSLQKPLPDP KKTSPRNANI AQEDSDDKKP EISKVRAMFD LVSHEKDELS FRKGDLINVI EVVYRDWWRG SLPTGEVGIF PLNYVAPVYA KSSDQIEKEL QIENRLLNVE SKKIDKVLAM LSAATNGNEN IDDEELENLY GQVSGLRSQL GHLIMKHTQR EKELKLLNEQ LAIEDKAFHD LLDKSISSFS NRNSYISSDV VPYPTGGNGS VNSGYPAVPN AYSGYNTYNG NGTPLAMQPT SLGFGNSIYA SQPQQQPPRQ VSQQMPPQDY QSYSNINSFP EVDRM
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