Gene PICST_32905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32905 
Symbol 
ID4840070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp928695 
End bp930122 
Gene Length1428 bp 
Protein Length475 aa 
Translation table12 
GC content41% 
IMG OID640391385 
Productpredicted protein 
Protein accessionXP_001385537 
Protein GI150866064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0302596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.166327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAG CAAAGAAGAC AACAGATTCA CTGTTGGAAC TGTTAATCAA GAGGGCTACT 
GATGAAACCT TGACAACCAA CAATTGGGAG TATATCATTG CTGTTTGCGA TAAGGTGAAG
AGCGACCCAG AAGTGGCAAC TAAGAAAGCA ATTACCATCT TAACAACACG ATTACAGAGT
AAAGATGCCA ATGTGTTGTT GAGAACGCTT TCCTTAATAA TTGCTCTTGG CGAGAACTGT
GGATCACGAA TGCAGCAAGA AATTGCTTCG GAAGCATTCT TGAAGCCGTT AACCAAGAAG
CTAAAGGAGA AAAAGTTGCA TGAAACGGTG AAGGTTGAAA TTGCCAAACT TATCGAACAA
TTGCACCAGT CTTTTAAGTC TGATCCATCG TTGAAGCCAA TGTCAGATGC CTATAACAAG
ATAAAACAGG AACACCCAAG ATACCTTGAA AGAAATGTAC CAGCTAAACC AGAGAAGCAT
GATGTCAGCT CTAAAACACA ATCGGAAGAG GATGAATTGC AAAGGGTCAT CAACTTATCC
TTACAGGAGT ACGAAAGAGA GCAGTTTTCG AAGAGTCTTC AGAAACCACT TCCAGATCCA
AAAAAGACTT CTCCTAGAAA TGCAAACATC GCCCAAGAAG ACTCTGATGA CAAGAAGCCT
GAAATAAGCA AGGTTAGAGC AATGTTCGAC TTGGTATCTC ACGAAAAAGA TGAACTTTCC
TTCAGAAAGG GTGATCTAAT TAATGTGATT GAGGTTGTGT ACCGTGATTG GTGGCGTGGT
TCATTGCCAA CTGGAGAAGT TGGAATATTT CCCTTGAATT ATGTTGCGCC TGTTTATGCA
AAATCACTGG ATCAAATTGA AAAGGAATTA CAAATTGAAA ACAGATTGCT TAACGTGGAG
CTGAAGAAGA TTGATAAAGT ATTGGCTATG TTGTCTGCAG CTACTAATGG CAACGAAAAC
ATAGACGATG AAGAGTTGGA GAATTTATAC GGGCAGGTTA GTGGATTACG CTCACAGTTG
GGCCATCTTA TCATGAAGCA TACCCAGAGA GAAAAGGAAT TGAAACTATT AAACGAACAG
TTGGCAATTG AAGACAAAGC ATTCCATGAT TTGTTGGATA AACTGATATC GTCATTTAGT
AATAGGAACT CTTACATTTC TCTGGATGTT GTTCCATATC CAACTGGAGG CAATGGTTCA
GTCAACAGTG GATACCCCGC CGTGCCTAAT GCATACTCTG GTTACAATAC CTACAACGGC
AATGGTACTC CTTTGGCCAT GCAACCAACG AGTCTCGGTT TCGGAAATTC TATTTATGCT
CTGCAACCCC AGCAGCAGCC CCCACGACAA GTGAGTCAGC AAATGCCACC GCAAGATTAT
CAACTGTATC TGAACATAAA TAGTTTCCCA GAGGTAGATA GAATGTAG
 
Protein sequence
MYKAKKTTDS SLESLIKRAT DETLTTNNWE YIIAVCDKVK SDPEVATKKA ITILTTRLQS 
KDANVLLRTL SLIIALGENC GSRMQQEIAS EAFLKPLTKK LKEKKLHETV KVEIAKLIEQ
LHQSFKSDPS LKPMSDAYNK IKQEHPRYLE RNVPAKPEKH DVSSKTQSEE DELQRVINLS
LQEYEREQFS KSLQKPLPDP KKTSPRNANI AQEDSDDKKP EISKVRAMFD LVSHEKDELS
FRKGDLINVI EVVYRDWWRG SLPTGEVGIF PLNYVAPVYA KSSDQIEKEL QIENRLLNVE
SKKIDKVLAM LSAATNGNEN IDDEELENLY GQVSGLRSQL GHLIMKHTQR EKELKLLNEQ
LAIEDKAFHD LLDKSISSFS NRNSYISSDV VPYPTGGNGS VNSGYPAVPN AYSGYNTYNG
NGTPLAMQPT SLGFGNSIYA SQPQQQPPRQ VSQQMPPQDY QSYSNINSFP EVDRM