Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32834 |
Symbol | |
ID | 4840347 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 736424 |
End bp | 737479 |
Gene Length | 1056 bp |
Protein Length | 340 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391662 |
Product | predicted protein |
Protein accession | XP_001385845 |
Protein GI | 150866299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.571907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCCA AGCTAAAGAA AAACGACTCC TCCAAATCGT CTTTGGAGTC TGCCAACGAG AAGTTGCAGA GAGTCTACAC GCCCTTCCAA CAGCCGTCAG ACAAAAGCGT CATCCCCACA GAGCCCGAGT TGTCGGCATC CCAGAAGGAA AAGTACTTGA CGGTGTTCAA ACACTTTTCG AATCCCGATA TCGCTATTCC CGTCAGCGAG GACAACCACA AGCATAAGGA CACCTCCCAG TACAAGCCGT TGACTGAGTC TGAAAAATCG TGGTTGACCA GAGAATGTTT CTTGCGTTAC TTAAGAGCCA CAAAGTGGGA CGAACAGGAA GCAATCAACA GAATTGAATT GACTCTAGCC TGGAGAAGAG AGTTCGGCAT TGATCACATT TTCGATACGG ATAACGAAGT CAACAAGGAT TTGGTGTCGG AAGAAAACGA AACCGGTAAA GAAGTCATTT TGGGCTACGA TAACGATTCC AGACCTTGCT TGTACTTGAA GCCCGGCAGA CAAAACACAA AGACAAGCCA GAGACAAGTG CAACACCTTG TGTATATGTT GGAAAGAGTC ATAGACTACA TGCCTTCGGG TCAAGATTCT CTAGCACTTC TTATAGACTT CAAGGCACAT CCCGTGGGCA CCCAAGGAGG TAAAATTCCT CCTATTGGGA TTGGTAGACA AGTATTGCAC ATCTTGCAGA CACACTATCC TGAAAGATTG GGTAGAGCTC TCTTGACTAA CATTCCTTGG TTGGGATGGA CTTTCTTGAA AATTATTCAC CCTTTCATCG ATCCATTGAC AAGAGAAAAG TTGGTTTTTG ACCAGCCTTT TGTCGACTAC GTTCCTGTGG GCCAATTAGA CAAGGACTTC AATGGTGAGG TCAACTTTGA ATATGACCAC AGCAAGTACT GGGAAAGAAT GGTGGAAATC TCCCAGGAAA AGAAAAAGGT GTACTACGAC AGATTCGTAT TATTTGGTAG CAAGATCGGA TTGAGTGAAG TAGACTTGAG AGGCACCCAC GAAGAGTTGA TCCACCAAAT TCCACTGCTT GACTAA
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Protein sequence | MFSKLKKNDS SKSVYTPFQQ PSDKSVIPTE PELSASQKEK YLTVFKHFSN PDIAIPVSED NHKHKDTSQY KPLTESEKSW LTRECFLRYL RATKWDEQEA INRIELTLAW RREFGIDHIF DTDNEVNKDL VSEENETGKE VILGYDNDSR PCLYLKPGRQ NTKTSQRQVQ HLVYMLERVI DYMPSGQDSL ALLIDFKAHP VGTQGGKIPP IGIGRQVLHI LQTHYPERLG RALLTNIPWL GWTFLKIIHP FIDPLTREKL VFDQPFVDYV PVGQLDKDFN GEVNFEYDHS KYWERMVEIS QEKKKVYYDR FVLFGSKIGL SEVDLRGTHE ELIHQIPSLD
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