Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32795 |
Symbol | |
ID | 4840030 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 652782 |
End bp | 653544 |
Gene Length | 763 bp |
Protein Length | 224 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640391345 |
Product | predicted protein |
Protein accession | XP_001385828 |
Protein GI | 150866282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.128685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC AAGTTCTCCT CTGTCTTTTT TCGATTCTTT GTTTGGCCAT CTCTGTCAAG ACTGCTTCTT ACTCTGATGA GTTGAGTTTG TTCGCAAGTG GAAATTCATA TTTCCCACTA GATTCTGGAA TCATCAAATT TGATTCCATA GAAATACCCT TTGATGGTAT CGGTGGATAT TTCCGGTCAA TAGACTCCTT TCTGTTTGAC AGGTTTTCGA AGTTGAAGGT GTTGTCCAAA ATATTACGTG CTGCTGTTGA AGCTAAAGCA ACTGGTGACA TATTGTATTT GTACAACTTC ATTGCTTTTA ATGGACAAGA TCGAAGTATG ACCTTGGACT ACACTTCTAA TTTTAAAGAT GAAGTATGTC TATTTTTGTG CAAGTATGAC ACAAATTCGA CAACGGAGTT ATCAGAAACT ACTGCAGACT CGAGGTTATC TGCTTATTAT AAGAATTTCC CAGTTGAAGA ATGTGAATAC AGTCGTGAGG AAGGATTTTG CGGCAAAAAC GTTTGGGTAC TGACGGTAGG TTCTGGACAT TCGACTCTTC AGTATAAATA TTTTTAATAT CTAATATGTT TAACAAATGA AAATCTATTC TATAAATGTC TAGCCAACCT CGGTCGAAAA GAATTGGCAA GTAGAACCTT TTTACTCATT TATTAGTACT ACCAAGGTTC ATTTTATGGG CTATTCCACC TTGAAGACCG TTGGCTTCGA AATACAGCTA CGTACATACC TTGAGCGAAC ATATTCAGAT TAA
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Protein sequence | MKFQVLLCLF SILCLAISVK TASYSDELSL FASGNSYFPL DSGIIKFDSI EIPFDGIGGY FRSIDSFSFD RFSKLKVLSK ILRAAVEAKA TGDILYLYNF IAFNGQDRSM TLDYTSNFKD EVCLFLCKYD TNSTTELSET TADSRLSAYY KNFPVEECEY SREEGFCGKN VWVSTPTSVE KNWQVEPFYS FISTTKVHFM GYSTLKTVGF EIQLRTYLER TYSD
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