Gene PICST_32795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32795 
Symbol 
ID4840030 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp652782 
End bp653544 
Gene Length763 bp 
Protein Length224 aa 
Translation table12 
GC content37% 
IMG OID640391345 
Productpredicted protein 
Protein accessionXP_001385828 
Protein GI150866282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.128685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC AAGTTCTCCT CTGTCTTTTT TCGATTCTTT GTTTGGCCAT CTCTGTCAAG 
ACTGCTTCTT ACTCTGATGA GTTGAGTTTG TTCGCAAGTG GAAATTCATA TTTCCCACTA
GATTCTGGAA TCATCAAATT TGATTCCATA GAAATACCCT TTGATGGTAT CGGTGGATAT
TTCCGGTCAA TAGACTCCTT TCTGTTTGAC AGGTTTTCGA AGTTGAAGGT GTTGTCCAAA
ATATTACGTG CTGCTGTTGA AGCTAAAGCA ACTGGTGACA TATTGTATTT GTACAACTTC
ATTGCTTTTA ATGGACAAGA TCGAAGTATG ACCTTGGACT ACACTTCTAA TTTTAAAGAT
GAAGTATGTC TATTTTTGTG CAAGTATGAC ACAAATTCGA CAACGGAGTT ATCAGAAACT
ACTGCAGACT CGAGGTTATC TGCTTATTAT AAGAATTTCC CAGTTGAAGA ATGTGAATAC
AGTCGTGAGG AAGGATTTTG CGGCAAAAAC GTTTGGGTAC TGACGGTAGG TTCTGGACAT
TCGACTCTTC AGTATAAATA TTTTTAATAT CTAATATGTT TAACAAATGA AAATCTATTC
TATAAATGTC TAGCCAACCT CGGTCGAAAA GAATTGGCAA GTAGAACCTT TTTACTCATT
TATTAGTACT ACCAAGGTTC ATTTTATGGG CTATTCCACC TTGAAGACCG TTGGCTTCGA
AATACAGCTA CGTACATACC TTGAGCGAAC ATATTCAGAT TAA
 
Protein sequence
MKFQVLLCLF SILCLAISVK TASYSDELSL FASGNSYFPL DSGIIKFDSI EIPFDGIGGY 
FRSIDSFSFD RFSKLKVLSK ILRAAVEAKA TGDILYLYNF IAFNGQDRSM TLDYTSNFKD
EVCLFLCKYD TNSTTELSET TADSRLSAYY KNFPVEECEY SREEGFCGKN VWVSTPTSVE
KNWQVEPFYS FISTTKVHFM GYSTLKTVGF EIQLRTYLER TYSD