Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32445 |
Symbol | |
ID | 4839349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1536053 |
End bp | 1536943 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390664 |
Product | predicted protein |
Protein accession | XP_001384988 |
Protein GI | 150865674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.176138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAG TCTCAGTCGC CATTTTTGGA ATTGGTGGAT CTTTGGGTAA ACCAATTATC GATGCCTTCG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCCATCAA GGTTGTAACA AGGAAGGATT TGCCATCTAC CGACAGAATT CAATATATTG TTGGTAACTT GGACGATGAA CTGGTCGATA GTTTGGCACA GAAATTGGAG GGTACTGATG TCGTTGTCGA GTTACTTGCT GTAGAGCCTG TTTTATTGAA AATCGTCGAG GAGATACTTC AGAAGGTTAA GCCGAAGTTA TTTCTTCCTT CTGAATTTAG TGTAGACATT GATCAGGTCA ACACTTATAT CCCTGGATTC TGGAGTGCCA TGTCGGATCA TGTTGAACAT GTAAGAGAGT CTGGAATTAA GACTGTAAGC ATTGTCACTG GCGAGTTTGC AGTTCCTGGC AGCTTCATGT ATGAATTGGT CTCACAAGTC GGAATAGACG TAAAGGAAAA AACGATCACC CACTTTGGTG ACCCAAATAC GAAGATCACC ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGATTACTTT GTATCCTCAA ACTATTCCAG ACATTGTTCG AATCCAGAGT GATGAAGTTA CCTTCCAGGA AGTTATCGAT AGATACATTC AAACCCATAA CGTTGAATTG AAGGTAGTCA AGACAATCCC TAAGGAACAA GTGGCCAAGG ACATTTTAAC CAGATTTGAA AGTGGTTTCA GCCTAGATGA AATTTTTCTC TATTTGCAAG CAATTGCATC TCAGGGTACC GATAAAGGTA TGCACTTTAG TGAAATTCAC AACGAATTGG TAAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
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Protein sequence | MSKVSVAIFG IGGSLGKPII DAFETGKFDD KIELPIKVVT RKDLPSTDRI QYIVGNLDDE SVDSLAQKLE GTDVVVELLA VEPVLLKIVE EILQKVKPKL FLPSEFSVDI DQVNTYIPGF WSAMSDHVEH VRESGIKTVS IVTGEFAVPG SFMYELVSQV GIDVKEKTIT HFGDPNTKIT ICKLADIANS VLSLITLYPQ TIPDIVRIQS DEVTFQEVID RYIQTHNVEL KVVKTIPKEQ VAKDILTRFE SGFSLDEIFL YLQAIASQGT DKGMHFSEIH NELVNPGESL WKWEKF
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