Gene PICST_32445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32445 
Symbol 
ID4839349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1536053 
End bp1536943 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content41% 
IMG OID640390664 
Productpredicted protein 
Protein accessionXP_001384988 
Protein GI150865674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.176138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG TCTCAGTCGC CATTTTTGGA ATTGGTGGAT CTTTGGGTAA ACCAATTATC 
GATGCCTTCG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCCATCAA GGTTGTAACA
AGGAAGGATT TGCCATCTAC CGACAGAATT CAATATATTG TTGGTAACTT GGACGATGAA
CTGGTCGATA GTTTGGCACA GAAATTGGAG GGTACTGATG TCGTTGTCGA GTTACTTGCT
GTAGAGCCTG TTTTATTGAA AATCGTCGAG GAGATACTTC AGAAGGTTAA GCCGAAGTTA
TTTCTTCCTT CTGAATTTAG TGTAGACATT GATCAGGTCA ACACTTATAT CCCTGGATTC
TGGAGTGCCA TGTCGGATCA TGTTGAACAT GTAAGAGAGT CTGGAATTAA GACTGTAAGC
ATTGTCACTG GCGAGTTTGC AGTTCCTGGC AGCTTCATGT ATGAATTGGT CTCACAAGTC
GGAATAGACG TAAAGGAAAA AACGATCACC CACTTTGGTG ACCCAAATAC GAAGATCACC
ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGATTACTTT GTATCCTCAA
ACTATTCCAG ACATTGTTCG AATCCAGAGT GATGAAGTTA CCTTCCAGGA AGTTATCGAT
AGATACATTC AAACCCATAA CGTTGAATTG AAGGTAGTCA AGACAATCCC TAAGGAACAA
GTGGCCAAGG ACATTTTAAC CAGATTTGAA AGTGGTTTCA GCCTAGATGA AATTTTTCTC
TATTTGCAAG CAATTGCATC TCAGGGTACC GATAAAGGTA TGCACTTTAG TGAAATTCAC
AACGAATTGG TAAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
 
Protein sequence
MSKVSVAIFG IGGSLGKPII DAFETGKFDD KIELPIKVVT RKDLPSTDRI QYIVGNLDDE 
SVDSLAQKLE GTDVVVELLA VEPVLLKIVE EILQKVKPKL FLPSEFSVDI DQVNTYIPGF
WSAMSDHVEH VRESGIKTVS IVTGEFAVPG SFMYELVSQV GIDVKEKTIT HFGDPNTKIT
ICKLADIANS VLSLITLYPQ TIPDIVRIQS DEVTFQEVID RYIQTHNVEL KVVKTIPKEQ
VAKDILTRFE SGFSLDEIFL YLQAIASQGT DKGMHFSEIH NELVNPGESL WKWEKF