Gene PICST_32313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32313 
Symbol 
ID4839304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1205253 
End bp1205687 
Gene Length435 bp 
Protein Length144 aa 
Translation table12 
GC content42% 
IMG OID640390619 
Productpredicted protein 
Protein accessionXP_001385237 
Protein GI126137427 
COG category[A] RNA processing and modification 
COG ID[COG5136] U1 snRNP-specific protein C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.711622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGT ACTACTGTGA TTACTGTAAT TCGTACTTGA CTCACGATAC CATGAGCGTG 
AGAAAGTCTC ATTTAATCGG TAGAAACCAC ATCAAATACT ATTGTACATA CTACGAAACA
AAGGCCAAGG AAACGGGAAT ATGGAATCCT GACGATTTGG TGTATGAAGT CACGTTTGAG
ACCCTTAACC GTGCTGCTCC TGGAAGTGCA CCTATACGAA GAAAGCATTA CGATCACGAT
CATGTGGATG TTTCGTACAA GACTGAAGAA ACCGATGGTA AGGACTCGGA AATAGACGCT
AAATATAGAG AGGAATCAGC ATTGAAATTG CCTCCTCCTC CAAACTTGAC AGGGTTCCCA
AATCCGCCAC CTTCTATATT TCATTACACA GAAGAGTATA AGAAAGCAAT TGCCAAGTAC
AAAGAGCAAT CATGA
 
Protein sequence
MPKYYCDYCN SYLTHDTMSV RKSHLIGRNH IKYYCTYYET KAKETGIWNP DDLVYEVTFE 
TLNRAAPGSA PIRRKHYDHD HVDVSYKTEE TDGKDSEIDA KYREESALKL PPPPNLTGFP
NPPPSIFHYT EEYKKAIAKY KEQS