Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32313 |
Symbol | |
ID | 4839304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1205253 |
End bp | 1205687 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390619 |
Product | predicted protein |
Protein accession | XP_001385237 |
Protein GI | 126137427 |
COG category | [A] RNA processing and modification |
COG ID | [COG5136] U1 snRNP-specific protein C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.711622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGT ACTACTGTGA TTACTGTAAT TCGTACTTGA CTCACGATAC CATGAGCGTG AGAAAGTCTC ATTTAATCGG TAGAAACCAC ATCAAATACT ATTGTACATA CTACGAAACA AAGGCCAAGG AAACGGGAAT ATGGAATCCT GACGATTTGG TGTATGAAGT CACGTTTGAG ACCCTTAACC GTGCTGCTCC TGGAAGTGCA CCTATACGAA GAAAGCATTA CGATCACGAT CATGTGGATG TTTCGTACAA GACTGAAGAA ACCGATGGTA AGGACTCGGA AATAGACGCT AAATATAGAG AGGAATCAGC ATTGAAATTG CCTCCTCCTC CAAACTTGAC AGGGTTCCCA AATCCGCCAC CTTCTATATT TCATTACACA GAAGAGTATA AGAAAGCAAT TGCCAAGTAC AAAGAGCAAT CATGA
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Protein sequence | MPKYYCDYCN SYLTHDTMSV RKSHLIGRNH IKYYCTYYET KAKETGIWNP DDLVYEVTFE TLNRAAPGSA PIRRKHYDHD HVDVSYKTEE TDGKDSEIDA KYREESALKL PPPPNLTGFP NPPPSIFHYT EEYKKAIAKY KEQS
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