Gene PICST_32265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32265 
Symbol 
ID4839658 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1074200 
End bp1075299 
Gene Length1100 bp 
Protein Length210 aa 
Translation table12 
GC content41% 
IMG OID640390973 
Productpredicted protein 
Protein accessionXP_001385215 
Protein GI150865834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTAC ATAGTGTCAA CAGATTTCTA TACCAATTCG TTGTATATTC TTCATTTAAC 
TTTGGAATTT TACCCGTGCA TTCCGGAATC ATTTTGCTTC TATTTTCGGT CACCTCTGAA
TTCTACGGAA GTGAGTATAT CGTCTGACTA CAGCAGTGTC GGTAAGTATG ATCCTCAGAT
ACATTAAACG ATTCCTTGTA TAGACTCCAA ATTCATATGG AATGGCGCAG TACCACTTTT
TTGAGCCCCG TTTGTTCTGT ACTGACTGCA TCTAGAGAAA CTATAGAAAC GGCTGTCAAC
TACAGGTGAT TAAATGGATC TAGCTAAAAT TCATCCACAA GACTGCAGCA TCACCATAAA
AGAGAGTAAA TTCAGAACTA CAAAGCGTTA TTAGATATTC GTAGAGATCT ACTTTCTCTA
TGCATGGGCA AGCGAATGGC TTTGTAGTTT CACAGCTATT TTGTTTAGAG TCGCGGCTTC
CATGTACTAG TTGCTTACCT TATAATACTC TTCCATCTAG CGAATATGCT GGTTTTGACA
AAACTACTAC CGTGATCCAA GCCTAACTGG GGTGGGTCAG ATGATGCTTT TCTTTTTTCT
GTGCTGCTAT TATTGAGATT ACCTTCAAAA ACGTCCATCA ACGAATCTGA ATTCAAGTAC
GACTTCATCC CCAAAACTGC TGAGCCAAAG GTACCTCATC TTACGAAGGA AGCCGTCAAG
CATGCCATTG CTCAAAACAA GGCTAAGCAG GTGGAAAATA ATTGTTTACC AAAGAAAGCA
ATCCATACAT CAAGTTTGAA TCCAATTTTG CGGACGTTTT CCACTGAGGT GAATCCGCTG
GTGCCGAACC TGACTTTTAG AAGACAAAAC AAGCAAATTG ACACTTCTAT TGTAAGAACA
GCCATAGTGC TGAGAAGAAG ACTACTGCCA GCAAGGAGAA GTACATTCGA TCATCGTTCA
ATCCAGTTAT TAAAGACGGT GGTCAAACAA CATCCCTACC TCTTGCCAAC TGGATGACCT
CGCTAAAGCT GAAACGTTAT TGTAGAAAGC ACCCTCGATA CCACGGCCTC TCAAAGACGG
TGCAGCCAGC AGCCAAATGA
 
Protein sequence
MDLHSVNRFL YQFVVYSSFN FGILPVHSGI ILLLFSVTSE FYGTVSPNWG GSDDAFLFSV 
SLLLRLPSKT SINESEFKYD FIPKTAEPKV PHLTKEAVKH AIAQNKAKQV ENNCLPKKAI
HTSSLNPILR TFSTEVNPSV PNSTFRRQNK QIDTSIEKYI RSSFNPVIKD GGQTTSLPLA
NWMTSLKSKR YCRKHPRYHG LSKTVQPAAK