Gene PICST_32254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32254 
Symbol 
ID4839382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1053043 
End bp1054539 
Gene Length1497 bp 
Protein Length498 aa 
Translation table12 
GC content42% 
IMG OID640390697 
Productpredicted protein 
Protein accessionXP_001384875 
Protein GI150865595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG AATTAACCCC GACGGAAAAG GTAGCCCGAC ATGGAGCTGT TAGTAAATAC 
TTGATATTGC TCGTAGCCTG GCTTGGTTCT GGACTATTCG CAACTGTATT ATGCATAGGA
GCCGTCTTTT ACCATCTTTG GCACAAGATC ACGGGAGAAG AGAAGTTCAA TGTTCCTGGA
GAAGAAGAGT ATAAAGCCAA CGGTTATGTC CCACGGAAAG CATTTGCTAA TTTGGAAAAT
ATGAAGCCAT CCAAGGACTT GCGTTACTAT GCTCTTGAAT TGGGTTTGGA CTTGGAAGAA
TATTCTATTA CTACAGAAGA CGGGTACGTC CTTACATTGC ACCATTTAAT TGACCCAAAA
GAGACGGTTT TGTCCCGTCA GACTAAGAAG CCTATATTGC TTCAGCATGG CTTGCTTTCT
TGCTCTGGTG CCTATTTGAC TACGGGACGC AATTCGTTGG CTTATTATTT ACAGGAGGAA
GGCTACGATG TGTGGATGGG TAATAATCGG TCGTGGTTCG AACCCAAGCA TACGTATTTA
GAAGGTAACT TACTACATAA TGAGGAATAC TGGGATTGGG ATATTCGTGA ATTGGCTTAC
TACGATTTGC CAGCTATAAT TGAAAACGTC TTGTCGCATA AACCTCACCA CGAAAAGTTG
GTTTTAGTAG GACATCTGCA GGGCTGTTGC CAGTCGTTCT TGCTATTAAA GAACGGCAAT
TTGCTGGCAT TTCACGACAA AATCGAGTAC TTCTTCCCGT TGGCTCCTGC TGTTTTTCCA
GGAGTGTCGT TCCACGATCG GGGGTTTATC CGGTTTATAC ATAACAGGGG TCCGTTAGCA
TATAAGTTGT GGTTTGGGTG TTGTTCGTTT ATGCGTACAT TGAGTCAAGT TCGTTTTTAT
CTTGCGACTA CTAGATTCTA CGGGTTTATG ACGTATGTAA TGTTCAAATT CTTGTTCGGG
TGGACTGCAA AAAAATGGGG CAAAAACAAG AAGGTATGGC ACTTTTGCTT TATCTTCAAC
GTAACTTATG TATCAGCTAA ATTGATGAAC TGGTGGTTGA GTTTCTATAT CGAAGATGGA
TTTTCGAACC AGGTCAGACC CAGAAAAGAT TACAAGACTG GAGCAAATTA CAAGTTTGTT
GAAAACACCC AGGAAACAGA AAAGGAAAAG GCTTCCAAAA CATTTTTCCC CTTTAAGCAG
TCGTGGTTTG ACTATTCTGA AACTACGGTG CCAATGGTGA TATTTGTGGG AGACGAAGAC
TACCTCGTAG ATGGAAAGAG GCTCGTAACC CACATGAGAC ACTATGAGCC CAAGTATGAA
GAGGGTCGTA ATTTGGATAT TGTAGAAATT GAAGGCTACA ACCATGTGGA TGTGGTTTGG
GCGGAGGATT TGATCGGAAT CATAGGAATG GTTATCACCA AGAAATTGAA GTCATTGGGT
GAGATAACGG AAACCAGTCC TGATGCCGAA AAGACCGTAC GCTCTGAAAG TAATTAG
 
Protein sequence
MFEELTPTEK VARHGAVSKY LILLVAWLGS GLFATVLCIG AVFYHLWHKI TGEEKFNVPG 
EEEYKANGYV PRKAFANLEN MKPSKDLRYY ALELGLDLEE YSITTEDGYV LTLHHLIDPK
ETVLSRQTKK PILLQHGLLS CSGAYLTTGR NSLAYYLQEE GYDVWMGNNR SWFEPKHTYL
EGNLLHNEEY WDWDIRELAY YDLPAIIENV LSHKPHHEKL VLVGHSQGCC QSFLLLKNGN
LSAFHDKIEY FFPLAPAVFP GVSFHDRGFI RFIHNRGPLA YKLWFGCCSF MRTLSQVRFY
LATTRFYGFM TYVMFKFLFG WTAKKWGKNK KVWHFCFIFN VTYVSAKLMN WWLSFYIEDG
FSNQVRPRKD YKTGANYKFV ENTQETEKEK ASKTFFPFKQ SWFDYSETTV PMVIFVGDED
YLVDGKRLVT HMRHYEPKYE EGRNLDIVEI EGYNHVDVVW AEDLIGIIGM VITKKLKSLG
EITETSPDAE KTVRSESN