Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32254 |
Symbol | |
ID | 4839382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1053043 |
End bp | 1054539 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390697 |
Product | predicted protein |
Protein accession | XP_001384875 |
Protein GI | 150865595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAG AATTAACCCC GACGGAAAAG GTAGCCCGAC ATGGAGCTGT TAGTAAATAC TTGATATTGC TCGTAGCCTG GCTTGGTTCT GGACTATTCG CAACTGTATT ATGCATAGGA GCCGTCTTTT ACCATCTTTG GCACAAGATC ACGGGAGAAG AGAAGTTCAA TGTTCCTGGA GAAGAAGAGT ATAAAGCCAA CGGTTATGTC CCACGGAAAG CATTTGCTAA TTTGGAAAAT ATGAAGCCAT CCAAGGACTT GCGTTACTAT GCTCTTGAAT TGGGTTTGGA CTTGGAAGAA TATTCTATTA CTACAGAAGA CGGGTACGTC CTTACATTGC ACCATTTAAT TGACCCAAAA GAGACGGTTT TGTCCCGTCA GACTAAGAAG CCTATATTGC TTCAGCATGG CTTGCTTTCT TGCTCTGGTG CCTATTTGAC TACGGGACGC AATTCGTTGG CTTATTATTT ACAGGAGGAA GGCTACGATG TGTGGATGGG TAATAATCGG TCGTGGTTCG AACCCAAGCA TACGTATTTA GAAGGTAACT TACTACATAA TGAGGAATAC TGGGATTGGG ATATTCGTGA ATTGGCTTAC TACGATTTGC CAGCTATAAT TGAAAACGTC TTGTCGCATA AACCTCACCA CGAAAAGTTG GTTTTAGTAG GACATCTGCA GGGCTGTTGC CAGTCGTTCT TGCTATTAAA GAACGGCAAT TTGCTGGCAT TTCACGACAA AATCGAGTAC TTCTTCCCGT TGGCTCCTGC TGTTTTTCCA GGAGTGTCGT TCCACGATCG GGGGTTTATC CGGTTTATAC ATAACAGGGG TCCGTTAGCA TATAAGTTGT GGTTTGGGTG TTGTTCGTTT ATGCGTACAT TGAGTCAAGT TCGTTTTTAT CTTGCGACTA CTAGATTCTA CGGGTTTATG ACGTATGTAA TGTTCAAATT CTTGTTCGGG TGGACTGCAA AAAAATGGGG CAAAAACAAG AAGGTATGGC ACTTTTGCTT TATCTTCAAC GTAACTTATG TATCAGCTAA ATTGATGAAC TGGTGGTTGA GTTTCTATAT CGAAGATGGA TTTTCGAACC AGGTCAGACC CAGAAAAGAT TACAAGACTG GAGCAAATTA CAAGTTTGTT GAAAACACCC AGGAAACAGA AAAGGAAAAG GCTTCCAAAA CATTTTTCCC CTTTAAGCAG TCGTGGTTTG ACTATTCTGA AACTACGGTG CCAATGGTGA TATTTGTGGG AGACGAAGAC TACCTCGTAG ATGGAAAGAG GCTCGTAACC CACATGAGAC ACTATGAGCC CAAGTATGAA GAGGGTCGTA ATTTGGATAT TGTAGAAATT GAAGGCTACA ACCATGTGGA TGTGGTTTGG GCGGAGGATT TGATCGGAAT CATAGGAATG GTTATCACCA AGAAATTGAA GTCATTGGGT GAGATAACGG AAACCAGTCC TGATGCCGAA AAGACCGTAC GCTCTGAAAG TAATTAG
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Protein sequence | MFEELTPTEK VARHGAVSKY LILLVAWLGS GLFATVLCIG AVFYHLWHKI TGEEKFNVPG EEEYKANGYV PRKAFANLEN MKPSKDLRYY ALELGLDLEE YSITTEDGYV LTLHHLIDPK ETVLSRQTKK PILLQHGLLS CSGAYLTTGR NSLAYYLQEE GYDVWMGNNR SWFEPKHTYL EGNLLHNEEY WDWDIRELAY YDLPAIIENV LSHKPHHEKL VLVGHSQGCC QSFLLLKNGN LSAFHDKIEY FFPLAPAVFP GVSFHDRGFI RFIHNRGPLA YKLWFGCCSF MRTLSQVRFY LATTRFYGFM TYVMFKFLFG WTAKKWGKNK KVWHFCFIFN VTYVSAKLMN WWLSFYIEDG FSNQVRPRKD YKTGANYKFV ENTQETEKEK ASKTFFPFKQ SWFDYSETTV PMVIFVGDED YLVDGKRLVT HMRHYEPKYE EGRNLDIVEI EGYNHVDVVW AEDLIGIIGM VITKKLKSLG EITETSPDAE KTVRSESN
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