Gene PICST_31917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31917 
Symbol 
ID4839489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp209591 
End bp210319 
Gene Length729 bp 
Protein Length242 aa 
Translation table12 
GC content48% 
IMG OID640390804 
Producthypothetical protein 
Protein accessionXP_001385057 
Protein GI150865724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.98867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGC TCTCCATTGC TGTCAAGCCG CTGTACCTTG TTGCTCTCTC TCGCCCAGTT 
GCCAGAGCTG TGCACCTGTC TGCGTTCGCC AGAGCCAAGG GTGACACTTC CTCTATCGAT
TCGTTCAGAT TACCTTCACA AACGTCCATC AACGAATGGG AATTCAAGTA CGACTTCATC
CCCAAAACTG CTGAACCAAA GGTACCTCCT CTTACCAAGG AAGCAGTCAA GCAGGACATT
GCTCAAAACA AGGCTAAGCA GGTGGAAAGG GAATTGTTTA CCAAAGAAAG CAATTCGTCC
ATCAAAGTTG AAGCCAATTC TGCCGACGTT TTCCACGGAG GTGAATCCGT TGGTGCCGAA
CCTGAATTCT TACACGACAA AGGTAGCAAA CCAGTTGACT CTTCTACTGT AGGAACTGCC
CATAGTGCTG AGAAGAAGAC TCCTGTCAAC AGAGAGAAGT ACATTCAATC ATCCGTTAAC
CCAGTTATCA ACGATGCTGA GGTGGTCAGC TATGGTGACA GCGAGGTCTC GCACAAGACT
TCAGAAGTCG ACAAGCAAAC CCCAGTAGTT GAAGATATAG AGCACGACAA TCTCCATCAT
GCTGGTGCCG AACATCCTGA GGCAGAGTCA TCCTCTTCTT CTTCTTCTTC CGGATACACC
GTGCCCTTGG TGTTGGTATT GGGTGGAGGA GCTGGTTATT ACTATTACAG CAGTTCCGAG
AAGAAGTAG
 
Protein sequence
MLKLSIAVKP SYLVALSRPV ARAVHSSAFA RAKGDTSSID SFRLPSQTSI NEWEFKYDFI 
PKTAEPKVPP LTKEAVKQDI AQNKAKQVER ELFTKESNSS IKVEANSADV FHGGESVGAE
PEFLHDKGSK PVDSSTVGTA HSAEKKTPVN REKYIQSSVN PVINDAEVVS YGDSEVSHKT
SEVDKQTPVV EDIEHDNLHH AGAEHPEAES SSSSSSSGYT VPLVLVLGGG AGYYYYSSSE
KK