| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31786 |
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| Symbol | PEX6 |
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| ID | 4838547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1688134 |
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| End bp | 1691670 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389862 |
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| Product | peroxisomal assembly protein |
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| Protein accession | XP_001384629 |
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| Protein GI | 150865419 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTG TCGTTTCGCC GATAGGAAAG CTTCCGCAAG CTTCGGTCAC GGCCGTGGCC
GATGTGTCCA TAGTTAACGA TCCAGAGTTG ATGAGATACG ATGCCTTGGA GTTATCGCTC
GACTTGTTCA ACAAGCTCTT TCCCGAGTCG ATTGAAGAAC CGAATCTCAC AAACAACAGC
AACGCCAATA ACATTAGCAG CAACAAAGGC GACAACGATA AGTTCGTGTT GATCAAATTC
TTGGGTGCAC CAGATTACTT CATCTCGTTC AAGATCTACA AGATCTCGGA CGTCAGCCAC
AAGCTGTCTA ACTTAGTGAA GTTGATCAAC AACTCCAACT TGACGAGATT CTCCAACGAC
AAGCTCACCT TGAACAGTGT CGTTATCCAG TCTATAGATA TCCGTGATGT TCCCAGCTTG
AGCTCAGTCT TTGTGTCTGT ACCCCACGAA ATCTACGCCC TCTTATCAAA CAAATCGCAG
TCAAGTATCA AGTCACAGTT CATGAATCAG TTCTTGCAAA GCAGCGGCAA TGTAGTAAAC
GACAGCGACT ACATCCGTTT AATAAACGGC AGAATAAAGC TCTGTGAACC TGTGTCCCAA
GGTCTTTTGG ACAGCAACAC TACTATCATT TTGATTAACC AGAAAGAAGA AGACCTTGAA
GATGGAGAAC CTCTTGATGA TATCGATCTC GACTACGAGC TTGAGGATGA AGACTTTTTT
GATCAAGTAG AGGACAACTT GGACTTGTCG ACTTACTTAC AATCCAGATT GAAGTTTAAC
AAAAATTCTC CAGCAACTAC TTCTCCCAAA TTCCATGTCA GACCTTTGCC TGAAAAGCTC
TCTGTGGACA GTCTTCCTCA GCAATGGGTC AAGGAGGATT CAGAGTTATA CTTATTCATC
AACTCGTCTG ACTTTATAAG GTTAGGCTTC CCTGTCTTCA ATGGAGATTT GATTAAGTTG
AAGTATGGCA CAGACAACTT CATCATTGTC CGTATCTTTA CCTTCACGGA ACCAAATTTG
ACTTTCAAAC AGGGAACTAT CTATGTATCG CCTATATTGT TGATCAATTT GGGCCTAATT
GAAACATCCA CTGTCACCTT TGAAGCAGTC CATGCCCAGG AAGGATCTAT TTCAAGTGTC
ATTCCCATCG CAGACTCCGT CACCATATCT AGAGTGAGCT CGCAAATTAC GATGGACAAG
ACATTCCAAC GTACTTTCTT CTCGAGTTTG AAATCAACTC TCAGCAACCA GCTTAAATGC
GTTAAGCAGG GAGATTTCTT CCCGGTCGTC ATAGACTCTG TAATGTCCAA AACGATCTTT
GACTATGAAA ACGACGACAT TGAGAACAGT AATGATAACA ACGAAGATGG TGATGCACTT
GATGTTATCC CTATAGGGGA CCCAGACGCG GTTGCCTGGT TTAAGATTGT TGAAGTCAAA
GGAAAGAGTG ATAATGGCTC TGATCAGTTT ATTATAGATC CAAACAAAAC ACTCTTGGTT
TCTTCTGGAG TTGAGTTTGT CAAGTTGCCC AAGAACGAAT TCTATCAGTG GTATAACTAT
ATCAACTTGC CACCATTGTT CAATTTTATC GAAAAACCAG AGTTTAAGTA TGCTAAGGAG
TTCAAAAAAG TGTTGACTAC ATGTATGTCA TCTAAGATAG CGTTGAAAAC GACGGTGTTG
TTGAATTCAT TGAGTAGAGG AATTGGGAAG ACTGCGTTGG TGAGAAATGT GGCTGTAGAA
TTAGGATTGA ATTTAATTGA GTTGGATTGT TTCGAATTGT TGAATCCGGG CCAGGAATTG
AAGACCATTG GATTGTTGAG CGGAAAGATC GACAAGCTCA TTTCCAATGC ACCAACAAAT
TCTAGTGCTT TCCATATGAT TTACTTAAAG CACATTGAGA GCTTGTGTCC TCTGGCAGAT
GAAAATGACC AGAACTCCAG CATCTTTGCG TCGTTGGCAT TGAAGATTAT CCAGACTTTG
AATGGGTACT TGAGCAACTA CCCGAACTTG GCTATAGTAA TGAGTTGTAA TGATTATGAT
AAATTGAATG GAGACCTAAA GACTATCATC AAGTTTACCA TTGATTTCTC GGTGCCTAAC
GAAACGGAAA GATTGGAAAT CTTCAAGTTC CTTATTCACA ATGAAAGGAA GAACATACTT
GGAATTCACC ACGAAATGGA CGATATCAAC TCGTTTCCAT TTGTTATAAG AAAGGATATA
AATTTCAAGA CTTTGGCTTT ACAGTCTGCT GGTTTGACTC CAAGAGATTT GATTTCCATT
ATTAAAAAGT CGAAAAAGTT AGCTCTAATT AGATTAACCA AGCTCTCTAA AGAGGTTGGT
ATTCCTGTTA GCAAATTGAT TAGAATTGGT AATGGTGGTT TGATTAACTG GTTACCTGAA
GATTTCAACC TGGCTATCAA TGAGGCTCGT AACCAGTTCA GTGACTCTAT AGGTGCACCA
AGAATTCCCA ATGTGAAGTG GGAAGACATT GGAGGTTTGG ACTTGGTCAA GGATGAAATC
TTAGATACTA TTGATATGCC GTTGAAACAT CCTGAATTGT TCAACAATGG TTTGAAGAAG
AGAAGTGGTA TCTTATTTTA TGGTCCTCCG GGTACTGGTA AGACGTTGTT GGCAAAAGCC
ATTGCTACCA ATTTCTCTTT GAACTTCTTT TCTGTCAAGG GTCCTGAGTT GTTGAACATG
TATATCGGTG AGTCTGAAGC CAATGTGAGA AGAGTTTTTC AAAGAGCCAG AGATGCCAAA
CCCTGTGTTA TCTTTTTCGA TGAGTTGGAT TCTGTAGCTC CCAAAAGAGG TAACCAGGGT
GACTCTGGTG GTGTAATGGA TAGAATTGTT TCTCAGTTGT TGGCTGAATT GGACGGTATG
AGTAGTGAAG GTGGTGATGG TGTTTTTGTG GTTGGGGCTA CTAATAGGCC AGATTTGCTA
GACGAAGCCC TTTTGAGACC AGGAAGATTT GACAAGATGT TGTATCTTGG TATTTCAGAT
ACGAATGAAA AACAGACCAA GATCTTGGAA GCTTTGACGA GAAAGTTCAA GTTACACGAT
AATGTCGATT TGGAAAAGAT CGCTGAAAAC TGTTCGTTTA CCTTTACTGG TGCTGATTTC
TATGCTTTGT GTTCTGACTC GATGTTGAAT GCCATGACCA GAGTAGCCAA TGAGGTGGAC
GTCAAGATCA AGGCATACAA CGACAACTTA GCTAGTCAGG GTAAGGGAGA AATATCATCC
AGATGGTGGT TTGACAATGC TGCCACAGAA GCTGACACCA CTGTATTGGT GCAAATGGAA
GATTTTGAAA AGGCCCAACG TGAGTTGAAT CCTTCGGTCA GTGCTGAAGA GTTACAACAC
TACTTGAGAG TCAGAGAGAA CTTTGAAGGA GGCAAGGATA AGGCGAAACA GCAGCCTCAG
GAACTGCAAC CTTTGCTGGA ACAAGATCTT ATTAATGGGT TTGCTGAGAA TGGATTCACC
ATTGATTTCT CGAACCCAGG GGCCGGAGCT CCAAACGGAA CTACTAATGG ACACTAA
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| Protein sequence | MPSVVSPIGK LPQASVTAVA DVSIVNDPEL MRYDALELSL DLFNKLFPES IEEPNLTNNS
NANNISSNKG DNDKFVLIKF LGAPDYFISF KIYKISDVSH KSSNLVKLIN NSNLTRFSND
KLTLNSVVIQ SIDIRDVPSL SSVFVSVPHE IYALLSNKSQ SSIKSQFMNQ FLQSSGNVVN
DSDYIRLING RIKLCEPVSQ GLLDSNTTII LINQKEEDLE DGEPLDDIDL DYELEDEDFF
DQVEDNLDLS TYLQSRLKFN KNSPATTSPK FHVRPLPEKL SVDSLPQQWV KEDSELYLFI
NSSDFIRLGF PVFNGDLIKL KYGTDNFIIV RIFTFTEPNL TFKQGTIYVS PILLINLGLI
ETSTVTFEAV HAQEGSISSV IPIADSVTIS RVSSQITMDK TFQRTFFSSL KSTLSNQLKC
VKQGDFFPVV IDSVMSKTIF DYENDDIENS NDNNEDGDAL DVIPIGDPDA VAWFKIVEVK
GKSDNGSDQF IIDPNKTLLV SSGVEFVKLP KNEFYQWYNY INLPPLFNFI EKPEFKYAKE
FKKVLTTCMS SKIALKTTVL LNSLSRGIGK TALVRNVAVE LGLNLIELDC FELLNPGQEL
KTIGLLSGKI DKLISNAPTN SSAFHMIYLK HIESLCPSAD ENDQNSSIFA SLALKIIQTL
NGYLSNYPNL AIVMSCNDYD KLNGDLKTII KFTIDFSVPN ETERLEIFKF LIHNERKNIL
GIHHEMDDIN SFPFVIRKDI NFKTLALQSA GLTPRDLISI IKKSKKLALI RLTKLSKEVG
IPVSKLIRIG NGGLINWLPE DFNSAINEAR NQFSDSIGAP RIPNVKWEDI GGLDLVKDEI
LDTIDMPLKH PELFNNGLKK RSGILFYGPP GTGKTLLAKA IATNFSLNFF SVKGPELLNM
YIGESEANVR RVFQRARDAK PCVIFFDELD SVAPKRGNQG DSGGVMDRIV SQLLAELDGM
SSEGGDGVFV VGATNRPDLL DEALLRPGRF DKMLYLGISD TNEKQTKILE ALTRKFKLHD
NVDLEKIAEN CSFTFTGADF YALCSDSMLN AMTRVANEVD VKIKAYNDNL ASQGKGEISS
RWWFDNAATE ADTTVLVQME DFEKAQRELN PSVSAEELQH YLRVRENFEG GKDKAKQQPQ
ESQPLSEQDL INGFAENGFT IDFSNPGAGA PNGTTNGH
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