Gene PICST_31707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31707 
SymbolERG10 
ID4838875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1486314 
End bp1487528 
Gene Length1215 bp 
Protein Length404 aa 
Translation table12 
GC content48% 
IMG OID640390190 
Productacetyl-CoA acetyltransferase 
Protein accessionXP_001384586 
Protein GI126136124 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.234055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC CACCTGTTTA CATTGTCGCT ACATCCAGAA CGCCCATCGG TTCTTTCCAG 
GGTACCCTTT CCTCGTTGAC CTACTCTGAC TTGGGCTCTC ACGCCGTGAA AACTGCTCTC
GAGAAGGTTC CCCAAATCAA GCCCCACGAC GTGGAAGAAA TCTTCTTCGG TGGAGTCTTA
CAGGCCAATG TCGGCCAAGC CCCTGCCCGT CAAGTTGCTT TGAAGGCTGG GCTCTCAGAA
GCAATTGTTG CCACTACTGT CAACAAGGTG TGTGCCTCTG GGTTAAAGGC TATCATTTTG
GGTGCACAGA CTATTATTAC CGGCAACGCT GATATCGTCG TCGCTGGTGG TGCCGAGTCC
ATGTCCAACA CCCCTTACTA CGTTCCTTCG GCCAGAGGCG GTGCCAGATA CGGAGATGCT
GCCTTGGTGG ACGGAATCCA AAAGGACGGT TTGTTGGATG TATACGAACA AAAGTTAATG
GGAGTTGCCG CCGAAAAGTG TGCTGCTGAT CACGGATTCT CCAGAGACGA TCAGGACCAG
TTTGCTATCG ACTCCTATAC AAAAGCACAG ACTGCCCAGG CTGCCGGTAA GTTTGAACAT
GAGATCGCTC CTGTCACCAT CAAGGGAGTC AGAGGTAAGC CAGATGTAAT TGTAAGTGAA
GATGAAGAAA TCAAGAACTT CAACGAAAAG AGATTGAGAT CGGCCAGAAC TGTTTTCCAA
AAGGAAAACG GAACTGTGAC TGCTCCAAAT GCATCCAAGA TCAACGACGG TGGTGCTGCT
GTAGTGTTGG TATCTGAATC TAAACTTAAG GAATTGGGCT TGAAGCCTTT AGCCAAGATC
AATGGATGGG GTGAAGCTGC CAGATCTCCT ATTGATTTCA CCATTGCTCC ATCTTTGGCC
ATTCCAAAGG CTTTGAAGCA TGCCAATATT TCTCAAGACC AAGTAGACTA CTTTGAGTTG
AACGAAGCTT TCTCTGTTGT AGGATTAGCC AATGCTACTC TCTGTAACAT CGACTCTGCC
AAGTTGAACG TCTATGGTGG TGCTGTTGCC TTGGGCCATC CTTTGGGTTG CTCTGGTGCC
AGAATCGTCA TCACTTTGCT TTCTGTGTTG ACTCAGGAAA GTGGAAAGAT TGGAGTTGCT
GGTGTTTGTA ACGGTGGAGG TGGTGCTTCT TCTATTGTCA TTGAGAGAGT CGACCATGAA
GATGCAAAAT TGTAA
 
Protein sequence
MTVPPVYIVA TSRTPIGSFQ GTLSSLTYSD LGSHAVKTAL EKVPQIKPHD VEEIFFGGVL 
QANVGQAPAR QVALKAGLSE AIVATTVNKV CASGLKAIIL GAQTIITGNA DIVVAGGAES
MSNTPYYVPS ARGGARYGDA ALVDGIQKDG LLDVYEQKLM GVAAEKCAAD HGFSRDDQDQ
FAIDSYTKAQ TAQAAGKFEH EIAPVTIKGV RGKPDVIVSE DEEIKNFNEK RLRSARTVFQ
KENGTVTAPN ASKINDGGAA VVLVSESKLK ELGLKPLAKI NGWGEAARSP IDFTIAPSLA
IPKALKHANI SQDQVDYFEL NEAFSVVGLA NATLCNIDSA KLNVYGGAVA LGHPLGCSGA
RIVITLLSVL TQESGKIGVA GVCNGGGGAS SIVIERVDHE DAKL