| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31477 |
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| Symbol | |
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| ID | 4839024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 901647 |
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| End bp | 903743 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390339 |
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| Product | predicted protein |
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| Protein accession | XP_001384125 |
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| Protein GI | 150865067 |
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| COG category | [R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5391] Phox homology (PX) domain protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.276981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.448135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACT CTGACACTTC TCCCTCTGGG GACAATAATC AATCAAATAA TGGAACAGAC
ATCGACACTA ATGAAGCAAA GCAAGAGGAG ACAAGCCCGC AATTACCACA GGAAGATGCA
AAGATAGCAG ACATTGGCTC CAGTATACCA TTTGCGAGCG ATGAAGACAA CAATCCGTTC
AATCACCAGG CTGAGCCCAG TTTGGATTTG GATGACGAAG ATTCACTTCT TCTATACAAC
TCTAACGATA AAAACAATGA CAATAACGAT AAAAAACTCG ATAAAAATAA TAGTAATAAT
ATCAGCAATG GCAATGGTAA AGAGAACAAT GGTAATATCA CTACTGGAAA AGATAACAAC
AATGGTAATG CTAATGATAC TATGGGTGGT ACTTTATCTA ACTTGGGATC TCTCGCAGGG
TTCAACACGG TTCACATAGA TGTAGAGTCA CGGGTTTCAA AACTACTCAG ACCCACTCGT
AGAGTTAAGG TTCAGATCAC CGAGGCTGGG AACTCCAACG AAGGAAGTGC CAATTCGCTG
AAGAAATACG TGGTCTATAC CATCAAGTTG ATAAACGTTG ACGACGTAAG TGACGAGATT
CTAACTCGTA GAAGGTATAG CGACTTCGAG TCGTTACGAG ATGTTCTCAC AAAGATCTTT
CCATTGGTGA TCATACCTCC AATTCCACCG AAGAACTATA TCAACTTGAC GATTCTCAAC
GGTTTGGTAG GTGGACAGTC TCAGAACGGG AACTCACCTC ATTCTTCCGC TTCTTCTGGA
GACCATTCCA CTACGGGCAA AGCTTACTCG TATATCAACT CAACTCACTT GAGTAAGAAT
AAACTCATAG AGCATCGTAA ACGTCTTCTT GGTAACTTTC TTAACAATTG CTTGTCTATT
CCCCAGATAA GGAATTTGGA TTTCTTTGCC AAGTTCTTGG ATCCGAACGC CAATTGGGTA
GATGAAGTCT CATTGATTAC GAGCCAATTA CCGAAATCAA TATATAATCT GAATCCTGAG
AACGGACTTA AATCAGAACC GATCTATGCA AGTTTGCCCA ATCCCAGCAA TAGCCACGGT
ATGTCTTTTT TCAAAGATAA TAAGAAGAAA ATCGCAAGCA AGACTAATAA ACTACTTGCA
AATGGCGGAA TAACGTCAGA CTCATCAAAT CAGACTGAAC AGAGCGTAAC TTCTACCACT
TCGGAAGACA GAACAGGTAA TTCTACGTAT ATAATCAACA CGTCTACTTT GGATGACATC
AACAAGAAGA TCATGGAAAA TTACTTGGGT TTATCCAACG ACTACACGGA GTTAGGAACA
ATATTCAATA CTTTCTCATT GGCTTTTTCT GAAGCTCCTC GTCAGAATGG AAAGAAAGTA
AGCGCTGAAG AAGAGACAAA GATCAATGCC ATATTCGATA AGATTGGCCA GATCTTTGAT
AGATCTTATA TAACAATCAA TGCTCTTTTG AGCGACTTGG AAACTAAATT CTCTGAGCCT
CTAGGTGAGG CCGTACAATA TTCCACCATT TTGCAGTTCA TTTCTAAGTA TCAAAGTAGA
AAGCTGAAGC AACAGGATAT GGTGGACTCC GAGATACGCG AGAAAAGAAA GGAGCTACAG
GAACTACTTC GTTCTGGTGA AGAAGCAAAC CGCATCGATG CTGCTGTCAA CTCTCCTACT
GGCTCTAAGA ACAAGAACTA TGACCTAGAG CCGGCTACTG AAAGACAAAG TGCATCTCAA
CCACCAGTAG CCTCATATAC ATCCAGCAAG TTCAAGTTGT TTCCAAGTAT GAACTCACTC
AAAAAGATTA CCCAGTATGT GAGTGAGATT ATTGACCAGA ACCCCGAAGA AACTAGAAAG
CAGCGGGTGC TATACCTCCA GAAAAAGATC AAGACGTTTG AAAAGTGTCA GCAGATAATG
TCTGAAGACG TTTCGTTCAT CACGGACGAG GTCAACAAGA ACTTTCACGC ATTCCACACC
AAGCAGCTCA AGATGATCTT TGACATCTTG CTCTGCTACA ACAGGTTTCT TATTGGTTGG
GCTAAGAAGA ACATTGATGT CTGGGAAGAG ATCCGCGAGG AGATCCAAAA TCTATAG
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| Protein sequence | MSHSDTSPSG DNNQSNNGTD IDTNEAKQEE TSPQLPQEDA KIADIGSSIP FASDEDNNPF
NHQAEPSLDL DDEDSLLLYN SNDKNNDNND KKLDKNNSNN ISNGNGKENN GNITTGKDNN
NGNANDTMGG TLSNLGSLAG FNTVHIDVES RVSKLLRPTR RVKVQITEAG NSNEGSANSS
KKYVVYTIKL INVDDVSDEI LTRRRYSDFE SLRDVLTKIF PLVIIPPIPP KNYINLTILN
GLVGGQSQNG NSPHSSASSG DHSTTGKAYS YINSTHLSKN KLIEHRKRLL GNFLNNCLSI
PQIRNLDFFA KFLDPNANWV DEVSLITSQL PKSIYNSNPE NGLKSEPIYA SLPNPSNSHG
MSFFKDNKKK IASKTNKLLA NGGITSDSSN QTEQSVTSTT SEDRTGNSTY IINTSTLDDI
NKKIMENYLG LSNDYTELGT IFNTFSLAFS EAPRQNGKKV SAEEETKINA IFDKIGQIFD
RSYITINALL SDLETKFSEP LGEAVQYSTI LQFISKYQSR KSKQQDMVDS EIREKRKELQ
ELLRSGEEAN RIDAAVNSPT GSKNKNYDLE PATERQSASQ PPVASYTSSK FKLFPSMNSL
KKITQYVSEI IDQNPEETRK QRVLYLQKKI KTFEKCQQIM SEDVSFITDE VNKNFHAFHT
KQLKMIFDIL LCYNRFLIGW AKKNIDVWEE IREEIQNL
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