Gene PICST_31316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31316 
SymbolOYE2.8 
ID4839056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp499833 
End bp501056 
Gene Length1224 bp 
Protein Length407 aa 
Translation table12 
GC content46% 
IMG OID640390371 
ProductNADPH dehydrogenase (EPB1) 
Protein accessionXP_001384056 
Protein GI150865010 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG TCAAGATCTC TCCATTGAAG GAAACTGAAG CTTTTCTGAC CATTAAGGTC 
GGTAAGAACA CCTTGAACAC CAAGATTGTC TACCCACCAA CCACTAGATT CAGAGCTTTG
GACGACCACA CTCCTTCTGA CTTGCAATTG CAGTACTACG GCGACAGATC CACTTTCCCA
GGTACTTTGC TTATCACTGA AGGTACTTTT GTTTCTCAAC AGGCTTCTGG ATACCCTAAC
GTTCCTGGTA TCTGGACTGA CAAGCACGCC AAGGCTTGGA AGGCCATTAC TGACAAGGTT
CACTCCAACG GTTCCTTCAT CTCTACCCAA CTTTGGTTTT TGGGTAGAGT TGCCAATGCT
GAATTCATGA AGGCTCACGG TTTGAGCCCA GTTTCTGCCT CTGCTACTTA CGAAAGTGAT
GCCGCTAAAG AAGCTGCCGA GGCTGTCGGT AACCCAATTA GAGCTTTGAC TACCCAAGAA
ATCAAGGATC TTGTTTACAA GACTTATGCT AATGCTGCTC AGAAGGCCAT GGATGCTGGT
TTCGACTACA TTGAACTCCA TGCTGCTCAC GGCTACCTTT TAGATCAATT TTTGCAACCA
TGCACCAATC AAAGAACTGA TGAATACGGT GGATCCATTG AGAACAGAGC CAGATTCATT
CTTGAGTTGA TTGACCACTT GTCTACCATT GTCGGTGCTG ACAAAATTGG TATCAGAATC
TCTCCATGGG CTACTTTCCA AAACATGAAG GCTCACAAGG ACACTGTTCA CCCATTGACT
ACTTTCTCTT ACTTGGTCCA CGAATTGCAA CAGAGAGCTG ACAAGGGTCA AGGTATTGCC
TACATTTCTG TTGTTGAGCC TCGTGTAAGT GGTATCGTCG ACGTCTCTGA AGAAGACCAA
GCTGGTGACA ACAAATTTGT CTCCAAGATC TGGAAGGGTG TTGTCTTGAA GGCAGGTAAC
TACTCCTACG ATGCTCCAGA GTTCAAGACA TTGAAGGAAG ACATTGCTGA CAAGCGTACT
TTGGTGGGTT TCTCCAGATA CTTTACATCC AACCCTGACT TGGTTCATAA GTTGCACGAC
GGTGTGGATT TGACTCCTTA TGACAGAAAC ACCTTCTACA GCAAGACCAA CTACGGGTAC
AACACCTATG CATTGGCCCC AGAAAAGGTT GACAAAGAAG AGGAAGACAA GAAGGTCGCC
CAACCTATTG TGTCTGAAGC TTAG
 
Protein sequence
MSAVKISPLK ETEAFSTIKV GKNTLNTKIV YPPTTRFRAL DDHTPSDLQL QYYGDRSTFP 
GTLLITEGTF VSQQASGYPN VPGIWTDKHA KAWKAITDKV HSNGSFISTQ LWFLGRVANA
EFMKAHGLSP VSASATYESD AAKEAAEAVG NPIRALTTQE IKDLVYKTYA NAAQKAMDAG
FDYIELHAAH GYLLDQFLQP CTNQRTDEYG GSIENRARFI LELIDHLSTI VGADKIGIRI
SPWATFQNMK AHKDTVHPLT TFSYLVHELQ QRADKGQGIA YISVVEPRVS GIVDVSEEDQ
AGDNKFVSKI WKGVVLKAGN YSYDAPEFKT LKEDIADKRT LVGFSRYFTS NPDLVHKLHD
GVDLTPYDRN TFYSKTNYGY NTYALAPEKV DKEEEDKKVA QPIVSEA