Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31029 |
Symbol | |
ID | 4838076 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1555579 |
End bp | 1556228 |
Gene Length | 650 bp |
Protein Length | 87 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389391 |
Product | predicted protein |
Protein accession | XP_001383919 |
Protein GI | 126134789 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4281] Acyl-CoA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.744138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.12604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCTC AGGAATTCAC TGACAAAGTA CGTCTGCTCT GATTCAAAGC GCTGTTCGTT GGCGGATACA ATTTTGAAAG TTTTGTCTGC CAATGGCTCA GCTCGGGCTG GTTTTCTCCA GCAATTCGGA TCTCATTTCG CATACTAACT AAGTGCCTAT TTAACACGTA AGTGTTTCTT CTGATTTCAA CATTTTGTGA CGTTTTGGTG TAATGAATCT TGATAATGTG GACATTGGAT AGTTGACATT GGTCATACTG AAGTTGTTGA ACTTGTTGAC AATCTAATTT CCAAGAATTG ATTCACAAAC GTATAACATT GATGAACTTG AAATTATTGA TCTTATTTCT AGCATTGATT CAATGGATCT CAATTTGAAA TCAGACGAGC AGTCGTGTTC AGGCAGCATA TAGGCCAACG CCGTCCAAAA CTTATCTAAG CGTCCTAATG ACGACGAATT ATTGAAGTTG TACGGTTTGT ACAAGCAAGC CACCGTTGGC GACAACACCA CTGACAAGCC AGGTATCTTT GACCTCAAGG GCAAGTACAA GTGGCAAGCT TGGAAGGACT TGGAAGGTAC CTCTCAAGAA GAAGCCGAGC AGAGCTACAT TGAATTGGCT ACTTCTTTGA TTGAAAAGTA CGACAGTTAG
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Protein sequence | MPSQEFTDKA NAVQNLSKRP NDDELLKLYG LYKQATVGDN TTDKPGIFDL KGKYKWQAWK DLEGTSQEEA EQSYIELATS LIEKYDS
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