Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30920 |
Symbol | |
ID | 4838334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1278087 |
End bp | 1279775 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 12 |
GC content | 34% |
IMG OID | 640389649 |
Product | predicted protein |
Protein accession | XP_001383873 |
Protein GI | 150864874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0721946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT CGACTGATAA AGAAAAGGAC GTTGAACTCT ACGATTTTAT TACCATTCTT AAGAAACTGA AACCCATAGA TTATGCATGC TACAAATACA CACACGACCT AGAAACTATT CCATCCATCT GTAATGAAAA TGAGACGGAC GCTAACTGCC CCGATCATAT TCCCACTCTA CCAGACACAA TTGCTCATTT AAAATTACTC AAAGCATTAG GCAAATTGAA AAGACAAGTT ATGGAGGAAA ATCCAGATTC TGATCATATT AAAATTTGGA AAGTTTATGT TACAAACGCA GTAAGGAGAT TTATAATTTT TATCTCATCT TTAAAAAAGT ATCTTAATTC TGATGTCAAC AACCATGTTG ATGAGAATAC AATTTTCTAT ACCTCTGGGA ATTCACAGAC AACTACATTA TTGGATCAAT TATTGCCACC ATTAGATGTG ATTATGGTTT GGCATTCATT CTTATTAAGT CCAAGAAGCT TCTACGATAA CTGCGTCAGA AATGATATAT TGTCCTTTGG GATGTTCCCT TTACCATTAA AGAAAATAAG TGAATCCATT GAAAATGCAA CCTTTGAGTA TTGTCCAAGC AAAAATCTCA AAGACAGATA TTTAGAAATT ATTCGTAGTT TCACATCTGA TTCTGAGGAT TTGGCATACG ATAACGACAA TATCTCTATG TTTGAACAGT CATTGTCTAT TACATGTCCT TGCTGTGAGG AAACAATTTT AACAGATGTC CCTTACACCA ATGAAGCTTC AACTGGATTT TCTGATAAGA AATTTAGTCA GAAGATAAAC TATACGAAAT GCAAATGCAA ATTCAATGAA TTAATTTCTC ATGAAGAATT AAGGAAACGA CAATTATATT CTGACATGAC CAATAATAAA CCACTTCCTG GGTTGTTTAA ATTTTTCTCA ACTGTTATCT CAGACAAGTA CCTCAGACAA GGAGATACAA GCAAACTAAA AGAATATATA AATTCAGAAT TTAGAGAATT GGGATTAGAA GGTGTTCGCT CGCGTTCCCT CGAAGATATT ATCGACTATA CTTCAAAAAA TATCAGTTAT GGAGATAGAA TGAGGACTTT ACTTGAACTT TATCAGAATA TGAATTTGAT TGATTTATCA GTCCATGGCC GATTGTCCAT TTGGGAAGAT CTAGTTGACC GCGTTGAAAG ACAATACAAA TTTACTTCAA AAATGAACGA AATCAATTGG CTCCATTCAC CTCATATTGA AATAGGTTTA ACAGAGTCGA CAGTCCGCTA CTGTAGATTT TTCGAATTAC TATCAAAATA CGGAGACCAG TTTCAGCTAA TACCTACATT GGATATTGAT CTTATTTGGC ATACACATCA ACTTTCAATG CATTATTATT TCAGTGATTG CCTCAATTGT GAAAAAGGAT GCGTAATTGA CCATGATGAA AAGATAGAAC TAACAAAACT TGATGAATAT TTTGATCGAA CTGACAGCTT ATATAAGGAG AGATACGGCG AGGAGTATTC AATCTGTCAC TGTTGGAACC ATTTACGTGA TACAGCTTAC TCACCGACAA AAAAATCAAA GGGAAACAAG AAATTTAGAA TAGAAAAGAG GAGACCGAAG CAATCTTATT CTAGCTTGGG AATTACAAAT ATCAGTATCC ATGATACTGG TTGTATCCCG AGCACCTAA
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Protein sequence | MKTSTDKEKD VELYDFITIL KKSKPIDYAC YKYTHDLETI PSICNENETD ANCPDHIPTL PDTIAHLKLL KALGKLKRQV MEENPDSDHI KIWKVYVTNA VRRFIIFISS LKKYLNSDVN NHVDENTIFY TSGNSQTTTL LDQLLPPLDV IMVWHSFLLS PRSFYDNCVR NDILSFGMFP LPLKKISESI ENATFEYCPS KNLKDRYLEI IRSFTSDSED LAYDNDNISM FEQSLSITCP CCEETILTDV PYTNEASTGF SDKKFSQKIN YTKCKCKFNE LISHEELRKR QLYSDMTNNK PLPGLFKFFS TVISDKYLRQ GDTSKLKEYI NSEFRELGLE GVRSRSLEDI IDYTSKNISY GDRMRTLLEL YQNMNLIDLS VHGRLSIWED LVDRVERQYK FTSKMNEINW LHSPHIEIGL TESTVRYCRF FELLSKYGDQ FQLIPTLDID LIWHTHQLSM HYYFSDCLNC EKGCVIDHDE KIELTKLDEY FDRTDSLYKE RYGEEYSICH CWNHLRDTAY SPTKKSKGNK KFRIEKRRPK QSYSSLGITN ISIHDTGCIP ST
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