Gene PICST_30725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30725 
Symbol 
ID4837992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp783096 
End bp783548 
Gene Length453 bp 
Protein Length150 aa 
Translation table12 
GC content38% 
IMG OID640389307 
Productpredicted protein 
Protein accessionXP_001383785 
Protein GI150864808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA CGAATCTGGG CAGCTTGGAA GAATGGAAAA GCATAACTTC GCAGATTTCC 
AGCTTGTTAG AGGCGAAATT TCAAATAAAA GCTACGGTGG TTCCAATTAC AAAAAATGAT
AATATGAATA AGAAAGTGGA TAAGATTCTT GAGCTGTTGC AACAAGAGAA GCCAGTAGTG
ATAGCGTCCA TTTCAAATGG CATACCGAAG GCCATTTCCA TCGTTGAAAT AGTCAAACAG
CAAATGAAGA ACAGAAGTTT GAATATAGCA CAATTCAACA ATCTCCAAAG TCATTCTTCA
TACACCAACC CAAATATAAA GTTTAGCAAA GAAAAAGATG ACGAAGATGT GTCTACTGAA
ATTAAGGGAA GAAAAGAGTA TAGTTTACCT GTGCTCCATA TTTTGTTGGG TGGCAAGGAT
ATGCAAGGGC CTCCAGAATG GACTAAGCAA TAG
 
Protein sequence
MTDTNSGSLE EWKSITSQIS SLLEAKFQIK ATVVPITKND NMNKKVDKIL ESLQQEKPVV 
IASISNGIPK AISIVEIVKQ QMKNRSLNIA QFNNLQSHSS YTNPNIKFSK EKDDEDVSTE
IKGRKEYSLP VLHILLGGKD MQGPPEWTKQ