| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30676 |
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| Symbol | |
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| ID | 4837933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 654706 |
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| End bp | 656874 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389248 |
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| Product | predicted protein |
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| Protein accession | XP_001383760 |
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| Protein GI | 150864787 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.105769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0372054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACATT CGCCGGGAAA TGCTTCACAA ACAACGCTTG AGCCAGTGAG CCACACCTAT
GGCGAGAAAC TAGCCCTCCC CCAGGTCACT CTACGTGCTA CTCTTGTAGG CTTGGTTATA
GGGTCCATAG TGCTCGTGCT GAACTTCCAG TTTGGACTCC AGACAGGCTG GGTGCTGATG
ATGTCACTTC CAGCTGCCTT GTTGGGTTTC ACGATCTTCA AATTGTCACC ATATTCTGAA
GATTTTACTG ACGTAGAGAA TGTCTATGTC CAAAGTGTAG CTGTAGCTGT AGGGACAGGT
CCTCTATGCT ACGGACTTAT AGGGATTGTA CCGGCTATCG AAAAGTTCCT CACAGCAGAA
GAGTCTGGCT TGGGCGACAA ATTTTCGTTT TCGTTGTTTG ACTTGATGGT GTGGTCGCTT
GGCTTGGGTC TCTTTGGAGT CTTTTTTGCT GTTCCACTCC GAAAGCAAGT GATTATCAAG
GAGAAGCTTC CCTTTCCCTC AGGAAGTGCT ACAGCCACTT TGATCTCAGT AATGCATGGA
ACCGAAATCT ACGACGACGA ACAGGAAGCA AAAGCCATCA AAAAACATGA AAATGCCTTG
TTAAACAAAA CGTCCATGTC TCAGGATATG GAAAACTATC TTGCCAACGA CGAAACAGAA
CAAGAAGAAG ACTCACCAGT AAAGCAAAAT AGTCAAGAAC CTTCAGTCTA CTCTAAAAAT
ATCCATTCGT TATTGATTAC ATTTCTGGTG TCTGCCACTT ATACATTGGT ATCGTATTTT
GTTCCTGTCT TGAAAAACTT GCCCATATTT GGCACAAATC TTTCCAACAA GTACAAGTGG
AATTTCCAGC CTTCTCCAGC GTATATTGGG CAGGGTATAA TCATGGGTTT ACCAACTGTA
TCGTACATGT TGTTTGGTGC GATTTTGGGA TGGGGCATCC TTGCACCCTT AGCCAAGAGT
AAGAACTGGG CCCCAGGAGC TATTGACGAT TGGATTCATG GAGGCCAAGG ATGGATTCTA
TGGATAAGTT TGAGTGTGAT GATCAGCGAC TCACTTGTTT CTTTTCTAAT AGTGACGTTC
AAATCGATCA GAAGCGGAAT CAAGATCATG AAAGATTTGA ACACCCAAAG ACATTATACA
GAAGCAACTC TGCAAACTTT AGAATTGCAA CAGTCGTTAC TCAACGAAGA CAGCGACAGA
AACTCGAATG AGGACCCCTC TAACAGCACA TACTCTGGTC AACGAGCTAA AACAGCCGAG
ACGTCTTCTA TTAGTCCTCT TTCCAGAGCC GAGATTCAGA AGGACTACTT GGTGAGCAAC
ACGATAACGT TTTCTGGAAT CATCCTTTCA TCCATTCTCT GTCTTATTTC TATCAGAATC
GTGTTTGGTT CCATTGTTCC GTACTATGCT GCCGTTGTAG CAATTGTTCT TGCCTTGTTC
TTCTCTGTTC TTGGAGTTAG AGCTCTTGGA GAAACAGACT TGAACCCAGT TTCTGGAATT
GGAAAGTTGT CGCAGTTGAT CTTTGCAGTG GTCATTCCAG CCAACCACCC ATCCAAAATC
TTGATCAACT TGGTAGCAGG AGGTGTTGCG GAAGCTGGGG CGCAACAGGC CGGAGACTTG
ATGCAAGACT TGAAGACAGG TCATCTTATA GGAGCCTCGC CCAAGGCACA ATTCATAGCA
CAAATCATCG GTACATTATA TTCGGTTTTC CTCAGCAGTA TAATGTACAA GGTCTACAAT
GCAGTATACA CCATTCCTGG AGATTTGTTC AGAATACCGA CAGCCGTGAT CTGGATCGAC
TGTTCTCGGT TGGTAACTGG ACAAGGCTTA CCACCTATGG CATTTGAATT TTCGATGATC
TTTGGAGCAA TCTTTGGGTT TATTGCATTG CTCAAAAATA CCATTCCTTC AAGTTCTCGT
TTCCACAAGT ATCTTGTATA CTTGCCCAGT GGTATAGCCG TAGGTATCGG TATCTACAAT
ACGCCGAACT TCACACTTGC ACGGTTTGTT GGCGGTGTTA TTGCTTACTG GTGGATAAAC
TTTGGAAATA AAACAGCTGG AAACAACAGA ATCGCCATGA TCATTTTCAG CAGTGGTCTT
GTTCTTGGAG AAGGGTTGTT GAGCGTGGTT ACGATGTTAT TGACGAGTTT GGGAGTAAAA
CATTTTTAG
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| Protein sequence | MSHSPGNASQ TTLEPVSHTY GEKLALPQVT LRATLVGLVI GSIVLVSNFQ FGLQTGWVSM
MSLPAALLGF TIFKLSPYSE DFTDVENVYV QSVAVAVGTG PLCYGLIGIV PAIEKFLTAE
ESGLGDKFSF SLFDLMVWSL GLGLFGVFFA VPLRKQVIIK EKLPFPSGSA TATLISVMHG
TEIYDDEQEA KAIKKHENAL LNKTSMSQDM ENYLANDETE QEEDSPVKQN SQEPSVYSKN
IHSLLITFSV SATYTLVSYF VPVLKNLPIF GTNLSNKYKW NFQPSPAYIG QGIIMGLPTV
SYMLFGAILG WGILAPLAKS KNWAPGAIDD WIHGGQGWIL WISLSVMISD SLVSFLIVTF
KSIRSGIKIM KDLNTQRHYT EATSQTLELQ QSLLNEDSDR NSNEDPSNST YSGQRAKTAE
TSSISPLSRA EIQKDYLVSN TITFSGIILS SILCLISIRI VFGSIVPYYA AVVAIVLALF
FSVLGVRALG ETDLNPVSGI GKLSQLIFAV VIPANHPSKI LINLVAGGVA EAGAQQAGDL
MQDLKTGHLI GASPKAQFIA QIIGTLYSVF LSSIMYKVYN AVYTIPGDLF RIPTAVIWID
CSRLVTGQGL PPMAFEFSMI FGAIFGFIAL LKNTIPSSSR FHKYLVYLPS GIAVGIGIYN
TPNFTLARFV GGVIAYWWIN FGNKTAGNNR IAMIIFSSGL VLGEGLLSVV TMLLTSLGVK
HF
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