Gene PICST_30674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30674 
Symbol 
ID4838011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp650884 
End bp651963 
Gene Length1080 bp 
Protein Length359 aa 
Translation table12 
GC content43% 
IMG OID640389326 
Productpredicted protein 
Protein accessionXP_001383406 
Protein GI150864546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0133378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AGAAGAAGGT GCCGGAACCG GCTCTAGTCA GGTCCAAAAA TAAACAGACT 
GATAAAAGAT CACAGAAACA AGAACAAGAT CTACAGGAAG AGCAAGACGA GATGAGTGAA
GACATAGTAA AGGATGAACA TGTACGAAAT ACCGATAAGG TCAAAGAAGC AGACAACGTA
GATCAGGATG ACGATGAAGA TGATTACGAT GAAGAAGAGG ATGAAGATTA CGATCCTGAA
GCAGTAGTTG AGACTAATAA AGAAGACGAA GAGGACGATG AAAAAGCAGA GAAGGATGAA
AAAGTGCCTG ATTTCTCAGC AATAGAATCT GCTACTATAA GTCAAGTTAG GACGAGGAAT
CAACGACTAC AGGAGCGACA GGTAGTGCAG TCAAGGTATA TTGGCAGCTT TGAAACCGAT
TCTCTGGGTC TAGTACCAGC GCCCAGATTA ACCGTAGATG TAGATTCCAT TTTCAATGAG
ATGAAGGAAA ACACGCTAAA TGATAGTAGA CCAGACTGGA AAGAATCGAT AACAGGAGAC
GAAGGCAGCA ACAAAAGTTC AAGTGACACA GGTAAAAATA AAGATGGTAC TCTCGGACCG
AGGAAGATCA AGATCCAGAC CTCATATGCC TTTGCTGGAA AACTCATTAC TGAAACAAAG
GAGGTCGACG AAGACTCGGC TGAAGCCAAG GCCTTCCTCA ACTCGACTTC TGTAGTTGCG
GCTCAGGATT CAGATGAAAA TGCTGTGAGG TCGTTTGTTC CTGTGATTCG TAAAATTCCA
TCAACAGGAG AAGAAGTAGA GTTGCGCATC AAATTGAAAA GACCTTCCTT GATAGACAAG
TTCATGTCTG CCCACGGAAG CAAGAAGCTG AAGTTGTCTA CACTTGAGAA GTCGAGATTG
GACTGGGCAA GTTTTGTTGA TCAGAGAAAG ATCGGCGATG AATTGAAGCT ACACAACAAA
GCAGGTTACC TTGATAAACA AGATTTCTTG GGACGAGTCC AGGAAAAGCA GGATATCGAG
TACCAGAAGG CAAAGGAGGA GGAAAGACTG CGCCAATGGC TCAAACAACA ACAGGGATAG
 
Protein sequence
MAKQKKVPEP ALVRSKNKQT DKRSQKQEQD LQEEQDEMSE DIVKDEHVRN TDKVKEADNV 
DQDDDEDDYD EEEDEDYDPE AVVETNKEDE EDDEKAEKDE KVPDFSAIES ATISQVRTRN
QRLQERQVVQ SRYIGSFETD SSGLVPAPRL TVDVDSIFNE MKENTLNDSR PDWKESITGD
EGSNKSSSDT GKNKDGTLGP RKIKIQTSYA FAGKLITETK EVDEDSAEAK AFLNSTSVVA
AQDSDENAVR SFVPVIRKIP STGEEVELRI KLKRPSLIDK FMSAHGSKKS KLSTLEKSRL
DWASFVDQRK IGDELKLHNK AGYLDKQDFL GRVQEKQDIE YQKAKEEERS RQWLKQQQG