Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30674 |
Symbol | |
ID | 4838011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 650884 |
End bp | 651963 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389326 |
Product | predicted protein |
Protein accession | XP_001383406 |
Protein GI | 150864546 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0133378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAC AGAAGAAGGT GCCGGAACCG GCTCTAGTCA GGTCCAAAAA TAAACAGACT GATAAAAGAT CACAGAAACA AGAACAAGAT CTACAGGAAG AGCAAGACGA GATGAGTGAA GACATAGTAA AGGATGAACA TGTACGAAAT ACCGATAAGG TCAAAGAAGC AGACAACGTA GATCAGGATG ACGATGAAGA TGATTACGAT GAAGAAGAGG ATGAAGATTA CGATCCTGAA GCAGTAGTTG AGACTAATAA AGAAGACGAA GAGGACGATG AAAAAGCAGA GAAGGATGAA AAAGTGCCTG ATTTCTCAGC AATAGAATCT GCTACTATAA GTCAAGTTAG GACGAGGAAT CAACGACTAC AGGAGCGACA GGTAGTGCAG TCAAGGTATA TTGGCAGCTT TGAAACCGAT TCTCTGGGTC TAGTACCAGC GCCCAGATTA ACCGTAGATG TAGATTCCAT TTTCAATGAG ATGAAGGAAA ACACGCTAAA TGATAGTAGA CCAGACTGGA AAGAATCGAT AACAGGAGAC GAAGGCAGCA ACAAAAGTTC AAGTGACACA GGTAAAAATA AAGATGGTAC TCTCGGACCG AGGAAGATCA AGATCCAGAC CTCATATGCC TTTGCTGGAA AACTCATTAC TGAAACAAAG GAGGTCGACG AAGACTCGGC TGAAGCCAAG GCCTTCCTCA ACTCGACTTC TGTAGTTGCG GCTCAGGATT CAGATGAAAA TGCTGTGAGG TCGTTTGTTC CTGTGATTCG TAAAATTCCA TCAACAGGAG AAGAAGTAGA GTTGCGCATC AAATTGAAAA GACCTTCCTT GATAGACAAG TTCATGTCTG CCCACGGAAG CAAGAAGCTG AAGTTGTCTA CACTTGAGAA GTCGAGATTG GACTGGGCAA GTTTTGTTGA TCAGAGAAAG ATCGGCGATG AATTGAAGCT ACACAACAAA GCAGGTTACC TTGATAAACA AGATTTCTTG GGACGAGTCC AGGAAAAGCA GGATATCGAG TACCAGAAGG CAAAGGAGGA GGAAAGACTG CGCCAATGGC TCAAACAACA ACAGGGATAG
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Protein sequence | MAKQKKVPEP ALVRSKNKQT DKRSQKQEQD LQEEQDEMSE DIVKDEHVRN TDKVKEADNV DQDDDEDDYD EEEDEDYDPE AVVETNKEDE EDDEKAEKDE KVPDFSAIES ATISQVRTRN QRLQERQVVQ SRYIGSFETD SSGLVPAPRL TVDVDSIFNE MKENTLNDSR PDWKESITGD EGSNKSSSDT GKNKDGTLGP RKIKIQTSYA FAGKLITETK EVDEDSAEAK AFLNSTSVVA AQDSDENAVR SFVPVIRKIP STGEEVELRI KLKRPSLIDK FMSAHGSKKS KLSTLEKSRL DWASFVDQRK IGDELKLHNK AGYLDKQDFL GRVQEKQDIE YQKAKEEERS RQWLKQQQG
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