| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30643 |
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| Symbol | GTA1 |
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| ID | 4837696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 578210 |
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| End bp | 579955 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389011 |
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| Product | Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) |
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| Protein accession | XP_001383743 |
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| Protein GI | 150864772 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.104467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.893568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCC AGTCGCTTGG TGTCTTTGTG ATAGCTTCGT TGGTCAACGG TGCAGCCATA
TCTTCCTACT CCATAAGATC CACTTTTGAT GTTCTTGCCG AGTCTCAGGC ACTTAATGAT
ACCACATATA ACTTCGCACA GACTGAGAGT GCTGAGCTCT TTCCGATGCC TGAATGTAAA
GGTATAACCC TCGAGGAAGC TACCATAGAC CAGTTGCAAG ATTACATGGC GCAGGGGAAG
TTATCTTCAG TGGATTTGGT TCAATGCTAC TTAGAGAGAT ACTTCCAGAT CAACGACTTT
GTCAACGGTG TTCTTCAGTT GAACCCGGAC ATGTTTTCGA TCGCTTCTAC TTTGGATAAT
GAAAGAAAGC TGGGAATTGT CAGGGGACCA CTTCACGGAA TTCCTTTTCT TGTCAAGGAT
AACTATGCTA CCAAGGACAA GATGCAAACC ACCTGTGGTT CCAATGCCTT GTTGGGTTCA
GTTGTTCCCA GAGATGCCCA TGTGGTATCC AAGCTCAGAG AAGCCGGGGC TGTTCTCTTT
GGTCATGCTA CCCTTTCTGA ATGGGCAGAT ATGAGATCAA ACTCTTACAG TGAAGGTTAC
TCAGCTGTTG GTGGACAAGC TAGATGTCCG TACAATCTCA CTCTTAATGG AGGAGGAAGT
TCTACTGGCT CCGGAGGATC TGTTGCCGCC AACTTGATTA TGTTTGCCCT AGGTACTGAA
ACTGACGGTA GTATCATCTC TCCGGCCGGT AATAATGGAG TAGTTGGCTT CAAGCCTACT
GTTGGACTCA CTTCAAGAGC TGGTGTAATT CCAGAATCTG AACATCAAGA TACTACAGGT
CCATTTGCTA GAACTGTAAG AGATGCTGTA TACGCTTTCC AGTATATGTA TGGAGTTGAC
GCCAGAGACA ACTACACTTT GGCACAAGTT GGAAAAGTTC CTGAAGACGG TGACTACTTG
AAGTTCTTGA GTGACAAAAC TGCTTTGAAG GGAGCCAAAT TTGGTTTGCC ATGGGCTAAA
CTCTGGTCGT CAGCAGATCC AGAACAAGTG GAAGGTTTGT TGGAGGCAAT CAAGTTGATT
GAAGAAGCTG GCGCAACTGT TTACAACAAC ACCGACTTTG GTAACTTGGA CGTCATTTCC
GACGATGGCT GGAACTGGGA TTTCGGAAGT GTTAACGAGT CTGAGTACAC CATTGTCAAG
GTTGATTTCT TCAACAATAT TGCAAGCTAT CTTTCGGAGC TTGAGAATAC CAAGATCAGG
TCACTTCAAG ATATTGTAGA CTACAACTAC GCTAATGACG GAACTGAAGG TGGTAATCCT
GGGACGCATC CTGCTTTTGA ATCTGGCCAA GATGGGTTAT TGGCTTCATT GGAATGGAGT
GGAATCAAGA ATGAGACCTA TTACCAGGCC ATTGAGTTTG TTCACCGCAC TTCCAGAGAC
GAGGGTATTG ACTACGCTTT AAACTACACT GATTCTGGAA CAGGGGAGAA CTTTCAATTG
GACGGTTTGC TTGTGCCATC GGGCCACTCT ATCACATATC AGCAAGCAGC CAAGGCGGGA
TACCCAATGA TAACCATTCC TGTGAATGAG ACCAGTGTTG GATTGCCTTA CGGTTTGGGA
ATTATGCAGA CAGCGTGGGC AGAACCACAA TTGATCAAGT ATGGCTCGGC CATAGAGGAC
CTCATCCAAG GTAGAACCAA GCCTAAATTC TTGGATTATT TAGCTAAGAA TATCCCAGTA
GTATGA
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| Protein sequence | MKVQSLGVFV IASLVNGAAI SSYSIRSTFD VLAESQALND TTYNFAQTES AELFPMPECK
GITLEEATID QLQDYMAQGK LSSVDLVQCY LERYFQINDF VNGVLQLNPD MFSIASTLDN
ERKSGIVRGP LHGIPFLVKD NYATKDKMQT TCGSNALLGS VVPRDAHVVS KLREAGAVLF
GHATLSEWAD MRSNSYSEGY SAVGGQARCP YNLTLNGGGS STGSGGSVAA NLIMFALGTE
TDGSIISPAG NNGVVGFKPT VGLTSRAGVI PESEHQDTTG PFARTVRDAV YAFQYMYGVD
ARDNYTLAQV GKVPEDGDYL KFLSDKTALK GAKFGLPWAK LWSSADPEQV EGLLEAIKLI
EEAGATVYNN TDFGNLDVIS DDGWNWDFGS VNESEYTIVK VDFFNNIASY LSELENTKIR
SLQDIVDYNY ANDGTEGGNP GTHPAFESGQ DGLLASLEWS GIKNETYYQA IEFVHRTSRD
EGIDYALNYT DSGTGENFQL DGLLVPSGHS ITYQQAAKAG YPMITIPVNE TSVGLPYGLG
IMQTAWAEPQ LIKYGSAIED LIQGRTKPKF LDYLAKNIPV V
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