Gene PICST_30611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30611 
Symbol 
ID4838056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp506887 
End bp507501 
Gene Length615 bp 
Protein Length204 aa 
Translation table12 
GC content42% 
IMG OID640389371 
Productpredicted protein 
Protein accessionXP_001383370 
Protein GI150864522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAC AATTGCCTGG CCAGACATTG AGATCTGTGA GGTTTACTCA ACCAGTCAGA 
TGTTTGTCTT CGATCACCAA GTTCGACACC AAGAAGTTTG TCCAATCGCT ACAGACCAGA
GGAGGATTCA CCCAGCAACA GGCTGAAACT GCAGTTAGCA TAGTTAGCAG AGCCATAAAT
GACGGGATCT ATTCGATAAC CAACAATTTG ATAACAAAAG AAACACTTTC ATCCACAGCT
TACCAGCAGA AAGTAGATTT TGCCAAATTA AAGGGTGAAC TCCAGACGAT GGACAAATCG
GAGTTCACTA ACTTGAAAAA AGAACAGGAG AACCTACGCA CGGACTTGAC CAATTTGAAA
AACAGATTGA AAGAGGAAAT GACAAGAAAT CTGGCTGGGG TCAGGTTGGA TTTGAATTTG
GAAAAGGGAA GAATCAGAGA GGAATCTTCG ATCCACGAAC TGAAGATTGA GGATACGTAT
ACACGAATCG ACGAGGAGAT TGCCAACATG CAAATGCAGA TCAAGTCGGT CAAGACTCAA
GTCATGCAAT GGTTGATTGG TGTTTCTTCT GGTACATTTG CGCTTTTGTT GGCATTCATC
AGATTCTTTG GATAG
 
Protein sequence
MFRQLPGQTL RSVRFTQPVR CLSSITKFDT KKFVQSLQTR GGFTQQQAET AVSIVSRAIN 
DGIYSITNNL ITKETLSSTA YQQKVDFAKL KGELQTMDKS EFTNLKKEQE NLRTDLTNLK
NRLKEEMTRN SAGVRLDLNL EKGRIREESS IHESKIEDTY TRIDEEIANM QMQIKSVKTQ
VMQWLIGVSS GTFALLLAFI RFFG