Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30324 |
Symbol | |
ID | 4836854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2524342 |
End bp | 2526378 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388169 |
Product | hypothetical protein |
Protein accession | XP_001382713 |
Protein GI | 150864035 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.358909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTA GTTTATTCAG ATCCAAGCAG TTCAAGTCGA AGAAAAACCT TAAGACCCTT ACTATTTCGG GTCCTCTTTC GCTTTCGGCT GCTGCTGCCA TGGCCGCTGA ACAAAACGTC TCCCCAAAAC AACCTCCTAC AGTGGCCTCT TCGAAGAGAA AGGGTAAATA TCCAGTTATT GTCTTGGTTG CCAAGTACAA GTTCGAAGCT GAAAACCCAG AGGAATTGAG CATAGACGTT CGTGACTACT TAAAGTTGTT AGAAAGAGAA GGCAATGGTT GGTTAAAGGT CCAGATGTTA GAAAAGAATG ACAAGGTTGG TATCGTGCCA GCTTCCTTTG TTGGCATAGC AGTCAATGAT ATAGTGAACC CTATTTCAAT TGAATGGCTC AACGAATACA AACTGGACAA CGACTACGAC AGCAGCCTGG AAGAAGTCGA AAGTCGCTCT CTCGTCGACC TGAAGGACCA GACCACTATT GCAAACGAAG ATCCATTCCC AGTATCTGCC TGCGTTGCTA AGGTTTACCT GGATAGCACT AACAAGTACT GGTACAGAAC CAGAATGACA ATGTCCACCA ACGAGGATAT CTATGTTGGT AAATGTTACC AACAGTTCTA CAAATTGCAT ACTGCCTTGG TGCTGAAGTA TCCAGAGGAA ACCTTACCCA AGTTGCCATT ACCAGTGCGA AGCTCTTCTG TCCTGGGCAA CAAGCGCTAC TCAACATTGA AATACGACAG AAAGTTCCTC AAGGACTTGA ACGCACTTAG CGAGGGTTTG AATTCTTACT TCAACAATTT GCTTTTAATC AGATCCATAC AAACATCTTC CGAAGTGTAC TCTTTCATTT TTGATTCACC ATACGTGAAA TTATCTCACA AAGAAAGCAA TATTAAAGAA GACGACAATA TGATGGCGGA AGTTGTGCAT AAGCTTGCTC CAAAATCTAT TGACATTAAC GAACTCTTGA GCTCCACAGG ATCCTTTTCA GCAACTGAAC CTTTACCTCC GTTGAAGACT TCATTATTGA CTAGCCCAAG AAAACATTCA TCCATAATCG ACCCTAACAT GAAGTGTTCA GCATACATCC AACAGAAGGA AAAGAAGATA GTCAACTCCA CCAGTAATAA CACCTTGGTG AGTTACTCAT CCCTTATTGA TGGGTACGAT GACAGCGAGG AAGAAAAGAG CAGCGGAAAG GAAGACAGCT ATGCCGAGTC AGAGGAATCT AAAAACGATT CCATCGACAC AAAGGCTACC TCCTTCGAAG ATGAATTTGA AGAAGCCAAA GACTTCAAGG CTCACCCTTA TGAAGAGTTT AAACCAAGCA AACCAATTGC TGACATCAAG AGTAATTCTA TTTCAAATTT TTCTTACCAT AGAACTCCTA GAGATTCCAG CAAGTTTGGG CACTCGTATT CGAACTCTGG CAGTGACCTC GACTCATTGT TCTCTCACAA AGGTAGCTCG CCAACTACCC CTATACTAGC AACAAGTGGG TTTCTTCCGG ATGCTGAAGT GGGAGGTAGT CCTGCAACCC CTTCTACTCC AATAATTGAA GAACAAGAAA CCTCATCCAT GCCGCTCACG TCCTCGTACC TTTGGAAGGA GGCCCGCAAG GCAAGAGGTA GATCGGATAC GAGCCTGAAG TACGCATCTG GCCAGTTCAA TGTTACACAA TACATGGATT CCATAGAAGC TCCTGGTTCT TCCACACTCG GTCAATTTCC ATCCAAGAGA AAGGACTCTG CAACCGTGCC CTTATGCAAT GCTAATGACT ACATCAAGAT TAAAATTTAT TTGAACAACA GGGAAGATGA TATTGTGGCC TTGAAAATCA AGAGAAACAA TCTTATTTCT ATACTTTACT TGAAGAAGCT TCTTTCGTTC AAGATTTACA AGGATTACAA TTTAATCAAC CACTACAAGT TGCAGGCCAA TGAGAGTTCC ATTGATGAAT TAGATGATAC CCAATTATTA CAATATATCA AATCCTTCTC CAAGGTGAGC TTGAGATTAG TTAGACTTAG AAGTTAG
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Protein sequence | MSASLFRSKQ FKSKKNLKTL TISGPLSLSA AAAMAAEQNV SPKQPPTVAS SKRKGKYPVI VLVAKYKFEA ENPEELSIDV RDYLKLLERE GNGWLKVQML EKNDKVGIVP ASFVGIAVND IVNPISIEWL NEYKSDNDYD SSSEEVESRS LVDSKDQTTI ANEDPFPVSA CVAKVYSDST NKYWYRTRMT MSTNEDIYVG KCYQQFYKLH TALVSKYPEE TLPKLPLPVR SSSVSGNKRY STLKYDRKFL KDLNALSEGL NSYFNNLLLI RSIQTSSEVY SFIFDSPYVK LSHKESNIKE DDNMMAEVVH KLAPKSIDIN ELLSSTGSFS ATEPLPPLKT SLLTSPRKHS SIIDPNMKCS AYIQQKEKKI VNSTSNNTLV SYSSLIDGYD DSEEEKSSGK EDSYAESEES KNDSIDTKAT SFEDEFEEAK DFKAHPYEEF KPSKPIADIK SNSISNFSYH RTPRDSSKFG HSYSNSGSDL DSLFSHKGSS PTTPILATSG FLPDAEVGGS PATPSTPIIE EQETSSMPLT SSYLWKEARK ARGRSDTSSK YASGQFNVTQ YMDSIEAPGS STLGQFPSKR KDSATVPLCN ANDYIKIKIY LNNREDDIVA LKIKRNNLIS ILYLKKLLSF KIYKDYNLIN HYKLQANESS IDELDDTQLL QYIKSFSKVS LRLVRLRS
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