Gene PICST_30324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30324 
Symbol 
ID4836854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2524342 
End bp2526378 
Gene Length2037 bp 
Protein Length678 aa 
Translation table12 
GC content42% 
IMG OID640388169 
Producthypothetical protein 
Protein accessionXP_001382713 
Protein GI150864035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.358909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTA GTTTATTCAG ATCCAAGCAG TTCAAGTCGA AGAAAAACCT TAAGACCCTT 
ACTATTTCGG GTCCTCTTTC GCTTTCGGCT GCTGCTGCCA TGGCCGCTGA ACAAAACGTC
TCCCCAAAAC AACCTCCTAC AGTGGCCTCT TCGAAGAGAA AGGGTAAATA TCCAGTTATT
GTCTTGGTTG CCAAGTACAA GTTCGAAGCT GAAAACCCAG AGGAATTGAG CATAGACGTT
CGTGACTACT TAAAGTTGTT AGAAAGAGAA GGCAATGGTT GGTTAAAGGT CCAGATGTTA
GAAAAGAATG ACAAGGTTGG TATCGTGCCA GCTTCCTTTG TTGGCATAGC AGTCAATGAT
ATAGTGAACC CTATTTCAAT TGAATGGCTC AACGAATACA AACTGGACAA CGACTACGAC
AGCAGCCTGG AAGAAGTCGA AAGTCGCTCT CTCGTCGACC TGAAGGACCA GACCACTATT
GCAAACGAAG ATCCATTCCC AGTATCTGCC TGCGTTGCTA AGGTTTACCT GGATAGCACT
AACAAGTACT GGTACAGAAC CAGAATGACA ATGTCCACCA ACGAGGATAT CTATGTTGGT
AAATGTTACC AACAGTTCTA CAAATTGCAT ACTGCCTTGG TGCTGAAGTA TCCAGAGGAA
ACCTTACCCA AGTTGCCATT ACCAGTGCGA AGCTCTTCTG TCCTGGGCAA CAAGCGCTAC
TCAACATTGA AATACGACAG AAAGTTCCTC AAGGACTTGA ACGCACTTAG CGAGGGTTTG
AATTCTTACT TCAACAATTT GCTTTTAATC AGATCCATAC AAACATCTTC CGAAGTGTAC
TCTTTCATTT TTGATTCACC ATACGTGAAA TTATCTCACA AAGAAAGCAA TATTAAAGAA
GACGACAATA TGATGGCGGA AGTTGTGCAT AAGCTTGCTC CAAAATCTAT TGACATTAAC
GAACTCTTGA GCTCCACAGG ATCCTTTTCA GCAACTGAAC CTTTACCTCC GTTGAAGACT
TCATTATTGA CTAGCCCAAG AAAACATTCA TCCATAATCG ACCCTAACAT GAAGTGTTCA
GCATACATCC AACAGAAGGA AAAGAAGATA GTCAACTCCA CCAGTAATAA CACCTTGGTG
AGTTACTCAT CCCTTATTGA TGGGTACGAT GACAGCGAGG AAGAAAAGAG CAGCGGAAAG
GAAGACAGCT ATGCCGAGTC AGAGGAATCT AAAAACGATT CCATCGACAC AAAGGCTACC
TCCTTCGAAG ATGAATTTGA AGAAGCCAAA GACTTCAAGG CTCACCCTTA TGAAGAGTTT
AAACCAAGCA AACCAATTGC TGACATCAAG AGTAATTCTA TTTCAAATTT TTCTTACCAT
AGAACTCCTA GAGATTCCAG CAAGTTTGGG CACTCGTATT CGAACTCTGG CAGTGACCTC
GACTCATTGT TCTCTCACAA AGGTAGCTCG CCAACTACCC CTATACTAGC AACAAGTGGG
TTTCTTCCGG ATGCTGAAGT GGGAGGTAGT CCTGCAACCC CTTCTACTCC AATAATTGAA
GAACAAGAAA CCTCATCCAT GCCGCTCACG TCCTCGTACC TTTGGAAGGA GGCCCGCAAG
GCAAGAGGTA GATCGGATAC GAGCCTGAAG TACGCATCTG GCCAGTTCAA TGTTACACAA
TACATGGATT CCATAGAAGC TCCTGGTTCT TCCACACTCG GTCAATTTCC ATCCAAGAGA
AAGGACTCTG CAACCGTGCC CTTATGCAAT GCTAATGACT ACATCAAGAT TAAAATTTAT
TTGAACAACA GGGAAGATGA TATTGTGGCC TTGAAAATCA AGAGAAACAA TCTTATTTCT
ATACTTTACT TGAAGAAGCT TCTTTCGTTC AAGATTTACA AGGATTACAA TTTAATCAAC
CACTACAAGT TGCAGGCCAA TGAGAGTTCC ATTGATGAAT TAGATGATAC CCAATTATTA
CAATATATCA AATCCTTCTC CAAGGTGAGC TTGAGATTAG TTAGACTTAG AAGTTAG
 
Protein sequence
MSASLFRSKQ FKSKKNLKTL TISGPLSLSA AAAMAAEQNV SPKQPPTVAS SKRKGKYPVI 
VLVAKYKFEA ENPEELSIDV RDYLKLLERE GNGWLKVQML EKNDKVGIVP ASFVGIAVND
IVNPISIEWL NEYKSDNDYD SSSEEVESRS LVDSKDQTTI ANEDPFPVSA CVAKVYSDST
NKYWYRTRMT MSTNEDIYVG KCYQQFYKLH TALVSKYPEE TLPKLPLPVR SSSVSGNKRY
STLKYDRKFL KDLNALSEGL NSYFNNLLLI RSIQTSSEVY SFIFDSPYVK LSHKESNIKE
DDNMMAEVVH KLAPKSIDIN ELLSSTGSFS ATEPLPPLKT SLLTSPRKHS SIIDPNMKCS
AYIQQKEKKI VNSTSNNTLV SYSSLIDGYD DSEEEKSSGK EDSYAESEES KNDSIDTKAT
SFEDEFEEAK DFKAHPYEEF KPSKPIADIK SNSISNFSYH RTPRDSSKFG HSYSNSGSDL
DSLFSHKGSS PTTPILATSG FLPDAEVGGS PATPSTPIIE EQETSSMPLT SSYLWKEARK
ARGRSDTSSK YASGQFNVTQ YMDSIEAPGS STLGQFPSKR KDSATVPLCN ANDYIKIKIY
LNNREDDIVA LKIKRNNLIS ILYLKKLLSF KIYKDYNLIN HYKLQANESS IDELDDTQLL
QYIKSFSKVS LRLVRLRS