Gene PICST_30193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30193 
SymbolECH1 
ID4837598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2196452 
End bp2197273 
Gene Length822 bp 
Protein Length273 aa 
Translation table12 
GC content45% 
IMG OID640388913 
Productenoyl CoA hydratase 
Protein accessionXP_001382646 
Protein GI126132242 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCA ACGCAGACGA CTTCAAACAA TTCAAAAATT TCATTGTCTC GGAAATTGAA 
GAAGGATTTG TCCATATTCA ATTTAACAAC CCCAAGACCT TGAACGCATT TGCTGACCAG
GACTGGAAGG ATTACTATGA AATATTAGTT CGTTTGGATG CCGACCCTGA GACAAATGTG
ATTTTAATCT CGTCAACCGT GCCCAAGGCC TTCTCCTCTG GTTTGAACTT GAAGGATGCC
CTCGCAACCA TGAGCTCCGC AGGTGAAGGA CATGATACTA TCAGGTTCAA GAAGTTGCAC
GATCACATTG CAGACTTCCA ATACTGTATT GGTACCCCTG CAAGAATCAA CACTCCTACC
ATTGCCCTTT TGAACGGGAT TAACTACGGA TTGGCTTTGG ATATCGCAGC AGCCACCACT
ATCCGTGTCG CTACAGCCGA TGCTCGTTTT TCCATCAGAG AAATCAAGAT TGGTATTTCA
GCCGATATCG GCTCGTTGCA GAGAATGCCT AATATAGTCA ACAATAAGTC GTTGTTATTC
CAACATGCAT TGACCGGCGA TGTCTTCAAA GCTGACGAAG CATTGAATCT TGGTTTCGTT
TCCAAGATTG TCGCTGATAT CCCAGCCGGC CTTGAGTACT GTAAGGAATT GGGTTCCGAC
ATCAACGGCC ACCAGCAGTG GGCCATCAAG GGTACTAAGA AACACATCCA GGACATCATT
GACAACAAGC CTGTCGAAGA AGGTTTGAAA GATATCAGAA ACTACAATGC TACCCATATT
AACGGTAAGT TCTTGGAAGG TATCCGTGCA GTCAAACTCT AG
 
Protein sequence
MTFNADDFKQ FKNFIVSEIE EGFVHIQFNN PKTLNAFADQ DWKDYYEILV RLDADPETNV 
ILISSTVPKA FSSGLNLKDA LATMSSAGEG HDTIRFKKLH DHIADFQYCI GTPARINTPT
IALLNGINYG LALDIAAATT IRVATADARF SIREIKIGIS ADIGSLQRMP NIVNNKSLLF
QHALTGDVFK ADEALNLGFV SKIVADIPAG LEYCKELGSD INGHQQWAIK GTKKHIQDII
DNKPVEEGLK DIRNYNATHI NGKFLEGIRA VKL