Gene PICST_30049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30049 
Symbol 
ID4837469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1817256 
End bp1818242 
Gene Length987 bp 
Protein Length328 aa 
Translation table12 
GC content44% 
IMG OID640388784 
Productpredicted protein 
Protein accessionXP_001383120 
Protein GI150864345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC CAGAAAAGAC GGATTCAGTT GAGACCGTGA AAAACACCAT CAAGTCTACG 
CAATTGACGA CTGAACACGC AAAAAAACTA ACGCAGGTCG TCAATTCCAT TCCGACAATC
TTGCTGAAGC TCGACAACAG CGAATACGAC GAGATCTTTG GGCATAGAAT CAATGTAGAC
TCTAAGAAAT TCGTAGACGT AGCCGTGAGA AATGAGATCT TGCTCAAGTT CTTAGCAGCT
GACGAGTACG ACGTCGAGCT TGCGACTAAG AGACTTATTG ATACGTTGAA TTGGAGAAAC
AAGTTCCATC CGTTAAGCGC GGCCTTTGAT GAGAACTTTA ACAAGGCATT GAACGATTTG
GGCGCTATCA CCAACTTTGT AGGGCTCAAG TCCGACAATT TGAATGTAGT AACCTGGAAC
TTTTACGGTG CTACGACTCC CAAGAAGTTA TTTGAAGAGT ACGGGGATAA TGCTGGAACT
ACAACGAACC AAAGACCAGG TTCTCAGTTC CTCAGATGGA GAATCGGGTT GATGGAAAAA
TCGCTCCAGC TAGTAGACTT CACCGACCCC AAGAACAACA AAATTGCCCA GGTCCATGAC
TACAACAACG TGTCGATGTT CAAAGTAGAC AAAGGCATGA GGGCTGCTAC GAAAGAAATT
ATCAAGATTT TCGGCGATAA CTACCCGGAG TTGTTGTCTA CCAAGTTCTT CATCAACGTG
CCGTCACTAA TGAGTTGGGT ATTCACTTTT TTCAAAACCA TCGGGGTCAT CAGTGAAGCC
ACATTGAAGA AGTTCCAAGT GTTGAACTCT GGTAACTTGA CTGAATGGTT TGGGAAATCC
AATTTGCCTC CAACTTATGG TGGAGATAGC AAGAGTCTGA TGAAGGAATT GAACGTGGCA
TCTATCAAGT TGAGTCCCTA TGGAGAATAT ATTTTAGAGG AGTTGGGCAA GAAAGAGATC
GAAGATGTTA TCGACGAGGT CGAGTAG
 
Protein sequence
MSEPEKTDSV ETVKNTIKST QLTTEHAKKL TQVVNSIPTI LSKLDNSEYD EIFGHRINVD 
SKKFVDVAVR NEILLKFLAA DEYDVELATK RLIDTLNWRN KFHPLSAAFD ENFNKALNDL
GAITNFVGLK SDNLNVVTWN FYGATTPKKL FEEYGDNAGT TTNQRPGSQF LRWRIGLMEK
SLQLVDFTDP KNNKIAQVHD YNNVSMFKVD KGMRAATKEI IKIFGDNYPE LLSTKFFINV
PSLMSWVFTF FKTIGVISEA TLKKFQVLNS GNLTEWFGKS NLPPTYGGDS KSSMKELNVA
SIKLSPYGEY ILEELGKKEI EDVIDEVE