| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29983 |
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| Symbol | HAL5 |
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| ID | 4836806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1642385 |
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| End bp | 1644406 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388121 |
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| Product | Protein kinase homolog, mutant is salt and pH sensitive |
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| Protein accession | XP_001383088 |
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| Protein GI | 150864321 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.486435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.497082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGT TTCGTTCCAA GAAGAAGGAC GATGGTGGCG GAACGGCAAG TTCACGGGCG
TCAAGATCTA ACTCGTTGCG ATCTGTTTCT TCACATACCT CTACAACATC GCAGTCTTCA
GCTGCGACCA GCTCATCTAC GCTTAAAGGA CTATTCAGAT CTGACAGCTC CAAGAAGGTT
GATGCTCTCG TTAATTCGAT CGATACACAA TTAGAAACAA AGTTGAAGAT CGATCCCGAG
CAAAGATCGA CAACAGAGTC TAAGTCCAGT GCTTATTCGC TTCCACGATT AAAGAAGAAA
GTGAGTACTA TAGCGGAAGT TGATGGTGAC GACTACAATA CTTTGCTCAA TGAGGAAGAA
AGTGACTATG ACACTGATTC GAATGACTCT GCGAATTCCG ATTCTTTCGA TGAAAGTACA
GCTGATTCTA CTAACGAAGA AGAAGAAATT GATTCCGACG AAGAAGAAGA AGAACACCTT
CATTCTCTTA AGGCCAAAGG AAAAATGAAC CAGAAACAGT TGGCAATCCA CCTCCTGACA
ATTATGGGCT ACTGCGGTAT GGAATTATCA CATGGCGATA AGCTTACTGA CATTGCAAAC
GAAGAGCTGG CCAGGACATA TTCGCTCTTG GAGCAGAACT TCAAGATCCA CAGATTGCCT
CCTGGATTTG GCAATGAAAC CTCGGTTATT GGCAAGAATC AGATAGAGTT GATCAACCAC
TTGAAGGAAA AGATGAAGAA GATCAGCAAA TCCAAATCGA ATGTACAGCT TCAATATCAG
TGCCTTTCTA GCGGAAAGAC ACTTTACGAA AGGTATGGCG TAGTTAAAGA TGTCATCGGT
AAAGGGGCTT ACGGGTTTGT TAAGATCATC GACCCAAACC CTGAGAAAGC GAAGGTCTTT
CTAGACTCAA CCCATGTTCT ATACGCTGTC AAGGAATTAC AGAAGAAGAA GACCAAGGAA
TCAGACGAGA AGTTCGCTGA TAGAGTGATA TCAGAATTCG TGATATCTTC AACTTTGAAC
TGTAAGCATG TCGTAAAGAC TGTAGATCTT ATGGTGACGT TGCCGCCTTT AAACTCAACA
GCGGAAAGCA CCTGGAAGTT CAGTCAAGTC ATGGAATGTA CTCCGGGCGG AGACTTATTT
ACATACTTGA CAACTACGGT TGACAGGAAA AACAAGCCAG TGAACTTCAT GTCTTTGGAT
GAAATTGACT GCTTTATCAA ACAAATCGCC AGAGGTTTGA AATATTTGCA TTTACACGGT
GTGGCACACT GTGATCTTAA GTTGGAGAAT GTCTTAATTG CTTACAAGTC TTCACCAAGT
TCAGAGATGG ATTCTCGTGG AAGGATGCTA TTGAAATTGT CAGATTTTGG CAAGTCTTCA
GTATTCAAAA CGGAATGGGA CCAATGCGAA CAGTTGGTAA AAAATCAAGG TCCGACAGGC
TCCATGCCTT ACATTGCGCC AGAAGAGTTT TCTTGCGCCT TGAAAAACCA GTATTCACTC
AGCAAGAAAG ATTGTTGGGC ACTTGGTATA ATCATATCAG TGTTGTTCAA TATCAGATGG
CACTATTATA CTGGCAAGAA GACAGATATG CTTTTCAACT GCGAAGACAC AGACGAGAGT
ACAAATACAT ACAGTTGTGG ATATTTCTGG GAGACTACCG AGTTGAAGTC TCATCACTTC
ACTTCAAAGG ACCAGAAATA CAAGGACAAG GTATTTGAAG AATATACAAA GACAAGAATG
GTTGCTGACT ACGATAACAA GACGAAAGAA TGGCTAGTTA CCAAAGTTGG CACATTCCCA
CCATTCGATA GAATCTTCAA GACAAGAAGC TTTCACGATT CGGACGACGA AAACTCAGAT
GACGAACTTA ATGACGATAA CGAGAACGAG GACGAGGATG ACTTATGTGA ACTAAGGAGG
ATATTGATGT ACAAGCTCTT GGATGTGGAT TTCAAAACAA GAATCACAGT TGACCATTTC
TTGAAATCAG ATTGGATGAC AGCAGTAGAA TGCTGCGTTT AG
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| Protein sequence | MPLFRSKKKD DGGGTASSRA SRSNSLRSVS SHTSTTSQSS AATSSSTLKG LFRSDSSKKV
DALVNSIDTQ LETKLKIDPE QRSTTESKSS AYSLPRLKKK VSTIAEVDGD DYNTLLNEEE
SDYDTDSNDS ANSDSFDEST ADSTNEEEEI DSDEEEEEHL HSLKAKGKMN QKQLAIHLST
IMGYCGMELS HGDKLTDIAN EESARTYSLL EQNFKIHRLP PGFGNETSVI GKNQIELINH
LKEKMKKISK SKSNVQLQYQ CLSSGKTLYE RYGVVKDVIG KGAYGFVKII DPNPEKAKVF
LDSTHVLYAV KELQKKKTKE SDEKFADRVI SEFVISSTLN CKHVVKTVDL MVTLPPLNST
AESTWKFSQV MECTPGGDLF TYLTTTVDRK NKPVNFMSLD EIDCFIKQIA RGLKYLHLHG
VAHCDLKLEN VLIAYKSSPS SEMDSRGRML LKLSDFGKSS VFKTEWDQCE QLVKNQGPTG
SMPYIAPEEF SCALKNQYSL SKKDCWALGI IISVLFNIRW HYYTGKKTDM LFNCEDTDES
TNTYSCGYFW ETTELKSHHF TSKDQKYKDK VFEEYTKTRM VADYDNKTKE WLVTKVGTFP
PFDRIFKTRS FHDSDDENSD DELNDDNENE DEDDLCELRR ILMYKLLDVD FKTRITVDHF
LKSDWMTAVE CCV
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