Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29838 |
Symbol | |
ID | 4837128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1305243 |
End bp | 1306259 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388443 |
Product | hypothetical protein |
Protein accession | XP_001383018 |
Protein GI | 150864267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0241478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT GGGATGTTTC TGGGTCTCAC AAGCAAGAAC TACCAAATTA CAGTCAGGAT GATGAAATTA CCTTCCTGTC TGAAAAGATC GAAGAATCTC CTCCAGCCGA TGTGCCGACA AACGTAGATG CCGGCAAAAG ATGGAGGTTC ATGTTATGTA ACAACTTCTT CAATTCTGAT CTAAAGGTTT TTGTGTCGGC TAATTCTGTG GAGAAGTACA AATCATTCAA GAACTCTAGC AGCGCACAAG CTGTTCAATA CGATCGCGAA TTGCAACTGC AAGGCATTGG CATTCCGTTG ATAAGAGCAG ATGTTCACGA TTTCCATGCT CACAAATTCT TAACTATAAA ACGGTACTAT GTAGATAAAG AAAAGATCGG GTCTCGAGGT TTTGATAGCA AGAAAGACTT GCATGACTTC TGTATCGTAC GAAAACATCG ACATGGTTCA TATTCTACCT ATGAATTGAA GTTTTCTCCT GATCCTAACG ACATAAGCCA GGACTTCACC ATTGTATTAT TTAAGCATGG TGTATTACCA ATTGCGGATT ATGTGTACAG AGGTAGTCGA TACAGGTGGA TATACGAAAC AAGGTCGTAC GAGTCTCCCT ATTGCTACTC CAATTACCTC TTGTCTCCGG GTCAGCATTC GATGACAGAT AATTGGGACA AAGAAACAAA CAAGTTGGAG AAATCCCTTG ACCCTAATAA CCCCTTGATA GGAGACTACA TGCTGAAAGC ATTCTCGTTA AAATCGCGTA ACACTAAGAA AGAGTACTAT TCTCCAATGC AACTAGCATC GTTGGACGAA AACAAGAACT ACGACCCTTT TAGTCGCTTC AGGCAAAAAG CTGTGTTCAC CATGAGAGAC ATGAACAATA CGTCCGACCA TCCCACGGTT GACCATGAAA GTATATATTC TGTGAATTTG GATGCTCTCA CCAGTCTCTG CATAGCGTTA GTATTCAAAC GTCGTGAAGA TATCAAAGAA GAAGCGAGGA AGATATTAGA AAACTAG
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Protein sequence | MSEWDVSGSH KQELPNYSQD DEITFSSEKI EESPPADVPT NVDAGKRWRF MLCNNFFNSD LKVFVSANSV EKYKSFKNSS SAQAVQYDRE LQSQGIGIPL IRADVHDFHA HKFLTIKRYY VDKEKIGSRG FDSKKDLHDF CIVRKHRHGS YSTYELKFSP DPNDISQDFT IVLFKHGVLP IADYVYRGSR YRWIYETRSY ESPYCYSNYL LSPGQHSMTD NWDKETNKLE KSLDPNNPLI GDYMSKAFSL KSRNTKKEYY SPMQLASLDE NKNYDPFSRF RQKAVFTMRD MNNTSDHPTV DHESIYSVNL DALTSLCIAL VFKRREDIKE EARKILEN
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