| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29641 |
|---|
| Symbol | |
|---|
| ID | 4837374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 759025 |
|---|
| End bp | 759705 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388689 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382384 |
|---|
| Protein GI | 150863787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.143642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGC AGAAGTTAAC CAAGAAACAG AGAAAGGCTT TGGAATTCCG TCTGGAAAAG
TCTAAGGAAG AAAGAGCCGA AGAAAAGGAA GAGAAAAAGA GAGCCAGAGA AAAAGAGGAA
AATAGTAAAG TAGAAAAGGA AGAGAAGACT AAGGAAGACA AGAATAAGGA AGACAAGAAT
AAGGAAGAAA CTGCAGAAGA TGAACAGCCC AAGAAAAAGA GAAAAACTAG AAGAGGAAAG
AAGGGAAAGG GAGCCAATGG AGGAAAGGGG CCCCGTTTCA TTCTTTTTGT AGGCAATTTG
CCATATGACA TTGAGCAGAC AGAGCTTTTG TCTCATTTCA AGAACAGCAA TCCTGACAGA
ATAAGACTCA GACAAGACAA GGGTATAGCG TTTTTGGAGT TCGACAACGA TACTCAGGAG
ATCCAGAGTA AGATGGAATT GGCATTGAAG ATGCACCATT CTACACTTCG AAACCGTAAG
ATCAATGTTG AGTTGACTGT AGGTGGAGGA GGTAACTCTG AAAATAGACT CAACAAGTTG
AAAGAAAAGA ACGAGAAATT ATTAGAGGAA AGAAGAGCTA AGGTCAAGGA AGATATCAAA
AAGAAGTCAA AGGAAGCCAC ATCTACGGCT CCAGCATCAT CTGCATCCAT TCATCCATCC
AGAGCAGCAT TGATTGGTTA G
|
|---|
| Protein sequence | MSEQKLTKKQ RKALEFRSEK SKEERAEEKE EKKRAREKEE NKDEQPKKKR KTRRGKKGKG
ANGGKGPRFI LFVGNLPYDI EQTELLSHFK NSNPDRIRLR QDKGIAFLEF DNDTQEIQSK
MELALKMHHS TLRNRKINVE LTVGGGGNSE NRLNKLKEKN EKLLEERRAK VKEDIKKKSK
EATSTAPASS ASIHPSRAAL IG
|
|---|
| |