| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29252 |
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| Symbol | FDH1 |
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| ID | 4851979 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3347588 |
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| End bp | 3349106 |
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| Gene Length | 1519 bp |
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| Protein Length | 378 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393687 |
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| Product | Glutathione-dependent formaldehyde dehydrogenase (FDH) (FALDH) (FLD) |
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| Protein accession | XP_001386965 |
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| Protein GI | 126276198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACTG TTGGAAAAGT ATGTATCATC TAAAGAGAGT AACGGTGGAT AATTCCGGTC
TGAATTGAGT GAAATTTTGC AAAGAAAGGA TCCTGTCTTT ATATTATTCC GATGACCATC
TCCAAGTTTC TACCCTTGGA GTTACGGCCT GGTCTTATCG ACGAAATAGT CGAATGCGGA
AACTATACGA GATAAGTGTC TGTAATGCTG ACAGCAAATT GCCAGACAGT GCATTATGAT
GGAATTGGCA TCCATATTGA TTCATATAAG TCCTTGATCC CTTTTTTCGA TCTTCAAGTG
ATCCTTAATT TTTCAGACAT TTCTCAGCCG TGAATTTTTC ACATCTTGAG AGACAAATTC
AGTGTCTTGC AACTTTTTCA ATGTGATACT AACCATTCAG ACTATTAAGT GTAGAGCTGC
CGTTGCCTGG GAGGCTGCCA AGCCATTGTC GATCGAAGAA ATCGAAGTCT TGCCTCCTAG
AGCCCACGAA GTCAGAATCA AGATCTTGCA CACTGGTGTC TGTCACACTG ATGCATACAC
TTTGAGTGGT GTTGACCCAG AAGGTGCTTT TCCTGTCATT TTGGGACATG AAGGTGCTGG
TATCGTCGAG TCTGTTGGCG AAGGCGTCAC CAATGTCAAG GTAGGCGACT CTGTCATTGC
TTTGTATACC CCAGAATGTA AGGAATGTAA GTTCTGTAAG TCTGGAAAGA CCAACTTGTG
TGGCAAGATC AGAGCTACCC AGGGTAAGGG TGTGATGCCA GATGGCACTT CTAGATTCAA
GTGCAAGGGC CAAGATCTCT TGCACTTCAT GGGTTGTTCC ACTTTCTCGG AATATACAGT
CGTAGCAGAC ATTTCTGTCG TTGCTGTGAA CCCAGAAGCC AAGCCAGACA GAACCTGTTT
GTTGGGCTGT GGTATCACTA CTGGTTACGG TGCTGCTACC ATCACAGCTG ATGTGCAAGA
AGGCGACAAT GTCGCTGTCT TCGGTGCTGG TTGTGTCGGT TTGTCTGTAG TCCAAGGTGC
TGTTCTGAGG AAGGCTGCTA AGATCATTGT TGTTGATATT AATGACAAGA AGAAGGAATG
GGCCGATAAG TTCGGTGCCA CCGACTTCGT CAACCCTACT ACTTTGCCAG AAGGAACTAC
TATTGTCGAC AAGTTAATTG AAATGACTGA CGGTGGTTGT GACTACACCT TTGACTGTAC
TGGTAATGTC AATGTCATGA GAAATGCCTT GGAAGCATGC CACAAGGGCT GGGGTACTTC
TGTCATTATT GGTGTTGCTG CTGCCGGTAA GGAAATCTCT ACTAGACCCT TCCAATTGGT
CACTGGTAGA GTCTGGAAAG GTGCTGCCTT TGGTGGTGTC AAGGGTAGAT CGCAATTACC
AGGTATTGTC GACGACTACA TGAACGGAAA GTTGAAGGTA GACGAGTTCA TCACCCACAG
ACACCCATTG GAAAAGATCA ACACTGCCTT TGAAGACATG CATGCCGGAG ACTGTATCAG
AGCCGTGATC GACTACTAG
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| Protein sequence | MSTVGKTIKC RAAVAWEAAK PLSIEEIEVL PPRAHEVRIK ILHTGVCHTD AYTLSGVDPE
GAFPVILGHE GAGIVESVGE GVTNVKVGDS VIALYTPECK ECKFCKSGKT NLCGKIRATQ
GKGVMPDGTS RFKCKGQDLL HFMGCSTFSE YTVVADISVV AVNPEAKPDR TCLLGCGITT
GYGAATITAD VQEGDNVAVF GAGCVGLSVV QGAVLRKAAK IIVVDINDKK KEWADKFGAT
DFVNPTTLPE GTTIVDKLIE MTDGGCDYTF DCTGNVNVMR NALEACHKGW GTSVIIGVAA
AGKEISTRPF QLVTGRVWKG AAFGGVKGRS QLPGIVDDYM NGKLKVDEFI THRHPLEKIN
TAFEDMHAGD CIRAVIDY
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