| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28888 |
|---|
| Symbol | |
|---|
| ID | 4851628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2381524 |
|---|
| End bp | 2382489 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393336 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386795 |
|---|
| Protein GI | 126275090 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.760508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.324549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTC AAAACAAGGT CTTATTAGTC GGTGCTACTG GTTACATTGG ACATCAGGCT
GCTTTAGCTC TTCGTCGTAA CAATTACTTG GTCTATGGAC TTGCCAGGTC CGAAGCCAAA
GCCGTTTTCT TGGCTAAAGA TGAGTTGATT CCAATTATTG GAACTGGCGA AAAGCCAGAT
TACCTTGATG AAATTGTCAC TCACGAAATC CACACCGTGA TTGACTTCAC TGGAACTCCC
ACTTCTACTG CTGACATCCT TGAGAAGTTG CAATCCATTG TCACGGAAAA GAAATTCAAG
GTCAATTTCA TTTACATCAG TGGTATCTGG GTTCACGGTG ACTCGTCCGA GAAAGTTACT
GAAGCGGACA AGCCTGTAAT TGAAAAGGTT GGATCCTTGG TCAAGTACAG AGTTGCTTTG
GAAGAGAAGA TTCTTTCTTT AAAAGATATC ATTCCAAGTA TCATCATCAG ACCAGGAATC
TTGTTTGGAG GCAAGGCAGA CATTTGGGGC GTCATGTTTG GCCAAGTCTT AGGTTCTGTC
TTAGCAGGTG ATTCTACTGT TACCATTCCT CTCAGAGAAG AATTGACGAG TGGCTTTATC
CACAACGAGG ACTTAGCCCA ACTCATCTTC CTCGCTGTTG AGAAGTTTGA TTCTGCTAAC
TCTGCAGTAA TCAAGTCTCC AATTTTTGAT GTTATCAGTG AAACAGTTAA TGTCCCATCT
ATTATTGTAG CCGGAGCTGA TGAGTTGGGT TTTAAAGGCA CGATAAACTT TACTGGTCAC
CCAACATTCG AGGAAAATCC CCTCCTTGAA CTGTTTGACA CCAATGTTCG CTGTAGCAAT
GAACTTGCGA AGAAGACTTT CGGTTGGGAG CCAAAAATTC ACTTGGCTGA AAACTTGGCT
CTTTTGGTTC GCACCTGGGT TGTTCACCAA AACGAGGACT TCTACACCAC TCTCTCTAAG
AAGTAA
|
|---|
| Protein sequence | MSTQNKVLLV GATGYIGHQA ALALRRNNYL VYGLARSEAK AVFLAKDELI PIIGTGEKPD
YLDEIVTHEI HTVIDFTGTP TSTADILEKL QSIVTEKKFK VNFIYISGIW VHGDSSEKVT
EADKPVIEKV GSLVKYRVAL EEKILSLKDI IPSIIIRPGI LFGGKADIWG VMFGQVLGSV
LAGDSTVTIP LREELTSGFI HNEDLAQLIF LAVEKFDSAN SAVIKSPIFD VISETVNVPS
IIVAGADELG FKGTINFTGH PTFEENPLLE LFDTNVRCSN ELAKKTFGWE PKIHLAENLA
LLVRTWVVHQ NEDFYTTLSK K
|
|---|
| |