| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28779 |
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| Symbol | GNP1 |
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| ID | 4851529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2068661 |
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| End bp | 2070355 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393237 |
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| Product | high-affinity glutamine permease |
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| Protein accession | XP_001388024 |
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| Protein GI | 126274761 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0302486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTAT CAGAAGTTAG CAAAGAGAAA GAATATCCAG TAGAAGATGC TGCCATCAGA
AGTGCGGACT CCTGTGAGTC AGCGACTCCC AAGTCTCACT GGAAGAGCTT CAAGGATTCC
TTCAAAAGGA AAGAAGTGGT AGAGGGAGAA GAACGTCTTC ACCAGACTAT GAATAAACGT
CATTTGAAAC TTATGGCTCT AAGTACTGGT CTTGGAACTG GTCTTTTGGT TGCAGCTTCT
GGTAAATTGC GTAACGCTGG ACCGGCTGGA GTACTTATTG GTTATTTCAT TGTTGGTACG
ATTATGCTTA TTCCAACCAT CAATTCTGTG TCCGAGTTAA GTATTGCCTA CTCTAGAATG
CCTGGCGGCT TCCAAGCATT TTATTCCAAA TTTATTGATG AAAGTGTTGG CTTTGCTTTG
GGCTGGAACT ATGCCTTACA GTGGGTAGTG GTTATATCTT TAGAGTTAGT CGTCGCTTCC
ATGACGGTCA AATTCTGGAC CACAAGCTTG CACCCAGATG TTATAGTAGC TATTGTGATG
GTGATCATTT TTCTTATTAA TTTGGGAGGA GCTAGAGGAT ACGCCGAAGC AGAATCAATT
ATGAATACGG TGAAGGTTCT ATTCTTAACA GGATTCGTCA TCTTCGGTTT AATTATCGAC
TTGGGCGGTG GTCCTCAAGG TTTCGTTGGA GGAAGATACT ACCGTGACCC AGGTGCATTT
ACCACTTTTA AGGGGTTGGT TACTGTTTTC TGTACTGGTG CATTTTCTCT TGGTGGCAGT
GAATTTGTAT CTTTAGCAGC CGCAGAAACT AAACACCCTC GTATTGCCTT GAGGGCTGCA
TCCAAGTTTG TCTACTATAA GGTATTCGTC CTTTTCTTGG GTTCTTTATT ATTTGTAGGA
TTATTGGTAC CATATGACAA TCCAGATTTG CTAGGCTCAA GCAAGGGAAC AAACACTTCA
CCATATGTTC TTGCGGCTCA GCTTCATGGC GTTAAAGTAC TTCCACATAT CATCAATGCC
GTTATTTTGA TTTCGGTGAC TTCAGTTGCA ACAGCTGCTA TGTACAGTAG TCCACGTTTC
ATCCAAGCCC TCGCTCAAGA AGGTCTTGCT CCAAAGTGGT TTGATTACAT TGACCGTCAA
GGAAGACCAT TAAGAGCTTG GTTGTGTACC GTGGTGTGTA CCTTCTTCTC ATTCATTGCT
GCCTATGAAA AACAAGATAT TGTTTTCAAC TGGATGTTAT CCATTTCGGC TCTTTGCTTT
GTCTTTGCCT GGTTATTTAT TTGCATTTGT CACCTCAGAT TCAGAGCGTG CTTGAAGGCT
AGAGGTATAC CTCTTAGTGA TTTGGCATAT GCTTCCCAAA CTGGTGTGAT TGGGTCTTGG
ACATCGATTA TCATCAACTG CTTGATTTTG ATTGGTCAGT TTTGGATTGC TTTGTTCCCA
ATAGGTTCAA ATAAACCTGA TGCTAATAAT TTTTTCCAAA ACTATTTGGG GGCTGTATTC
ATTCTTGTAT TCTACTTTGG TCACAAACTT TGGACTAAGA ACTGGAAATT TTATAAGTCG
GTGGATGAAA TCGACTTTGA TACAGGCAGA ATCAAGTACG ACTCGGAAAT ATTACAATTG
GAAATTCTAG AGGACAAGGA GCGCTACAAA AGAGCAAGCA TACTCAAAAA GATCTATATC
ACTCTCTTCG ATTAG
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| Protein sequence | MSLSEVSKEK EYPVEDAAIR SADSCESATP KSHWKSFKDS FKRKEVVEGE ERLHQTMNKR
HLKLMALSTG LGTGLLVAAS GKLRNAGPAG VLIGYFIVGT IMLIPTINSV SELSIAYSRM
PGGFQAFYSK FIDESVGFAL GWNYALQWVV VISLELVVAS MTVKFWTTSL HPDVIVAIVM
VIIFLINLGG ARGYAEAESI MNTVKVLFLT GFVIFGLIID LGGGPQGFVG GRYYRDPGAF
TTFKGLVTVF CTGAFSLGGS EFVSLAAAET KHPRIALRAA SKFVYYKVFV LFLGSLLFVG
LLVPYDNPDL LGSSKGTNTS PYVLAAQLHG VKVLPHIINA VILISVTSVA TAAMYSSPRF
IQALAQEGLA PKWFDYIDRQ GRPLRAWLCT VVCTFFSFIA AYEKQDIVFN WMLSISALCF
VFAWLFICIC HLRFRACLKA RGIPLSDLAY ASQTGVIGSW TSIIINCLIL IGQFWIALFP
IGSNKPDANN FFQNYLGAVF ILVFYFGHKL WTKNWKFYKS VDEIDFDTGR IKYDSEILQL
EILEDKERYK RASILKKIYI TLFD
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