Gene PICST_28751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28751 
Symbol 
ID4851503 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2000913 
End bp2001947 
Gene Length1035 bp 
Protein Length268 aa 
Translation table 
GC content39% 
IMG OID640393211 
Productpredicted protein 
Protein accessionXP_001387618 
Protein GI126274675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.521244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTT CCGCTGCTCA AACTCAAGAT CGAATCGAAA ATGAATTGAA CAACATGCAT 
TCAAAGAACG AGGTGCTATA TACTGGAAAC ATTGGCGATG CCGATATTGG ATCACTTCGT
CCAGTTTCGG GCTCGTCACT GGATCCAAAC GAACTGGTGG ATGATAGCCA CACTTCTACG
TCTGACGTCC TTGTCAATCA AAGAGGACGT AGAGTTTCAC GCCTGAAGAT CATGAATATG
GTATGGGACG TAGTTGACGG TTTTGAGGAT CGATTACTGA AATTGCCAGT ATTGGATGCA
TATTTTGAAA TTTTGGCAAA GTATCAAGCA GTGCTTGATA GTGTGTACAG ACGGTTTCCA
CAACTAAGGG AGATTGTTTT GAATGACTTC GACGTCAGCT CAATTCCGGA GACTAGGTTG
TTTTTGGATA GGTTCGATCA AGAGAGCAGG GTATTCTTCT ACAGATTATT GGCTCAATAA
ATTGAAAATA TATTAAGAGA TAACGTAGAA CCAGCCTTCC AAAAAGAAGC AAAGACTATT
ACATTGAAGG ACATTATCAC CTATATTGAA TCAAAGGATT GTGTTGAGGT TACAGAACAG
ATCATTGAAT ACTTCAAGCA ATTTAATATG AACAACAGAT TACTTAGCAC AATTGATATT
GAAAAGAACC ATGCAAGAAT AGTATCATCC ACCCATCGAA AGATCGTTTT GTTCGTCAAA
ACTATGAACC CATAGGACTT TATTGAGTAT TTCTTGTATA TTAATAACAA CAAAGAAGCG
AATGTCAATG TATTAGGTCC GCAACTAAAT GAACAGTTCC AACTCTTCAG GAATGATTCG
TCAAAAGTGG CTCCTCCTCT TCGCTACACT TTTAGTCAGA TACGATCCTA TTCTGCATTT
GCCGAACCCT GCAAACATCG TTCTGGTAAA AAAGGAAAGG TGACTGAAGT AAAACCCGAA
AAAGGTTATG GGCTCAAAGA GAACATAGAG ATCTTAGCAA ATACAATGTT TTTCTTAGAG
GTTAATTCGA AGTAG
 
Protein sequence
MPISAAQTQD RIENELNNMH SKNEVLYTGN IGDADIGSLR PVSGSSLDPN ELVDDSHTST 
SDVLVNQRGR RVSRLKIMNM VWDVVDGFED RLLKLPVLDA YFEILAKYQA VLDTFQKEAK
TITLKDIITY IESKDCVEVT EQIIEYFKQF NMNNRLLSTI DIEKNHARID FIEYFLYINN
NKEANVNVLG PQLNEQFQLF RNDSSKVAPP LRYTFSQIRS YSAFAEPCKH RSGKKGKVTE
VKPEKGYGLK ENIEILANTM FFLEVNSK