| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28619 |
|---|
| Symbol | MGM1 |
|---|
| ID | 4851385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 1674313 |
|---|
| End bp | 1676883 |
|---|
| Gene Length | 2571 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393093 |
|---|
| Product | mitochondrial dynamin-like GTPase |
|---|
| Protein accession | XP_001387550 |
|---|
| Protein GI | 126274449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.222715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.433771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCACA TTGGGTTCAT CAAGATTCTA GCCAAAACGA CAAGGATCCC GGCGTATGTG
GGGGGCACCC TTGCTGCTGG TGGGTCTTAT GTAGCTTACA AGGTGGAGCA GGCTCTGACG
TATACTCAAG ACCAGCTTCT GTCAATCAAA GACTTCACGC AAGGCGTTTT TGATACTGCC
GGCGACTTTT TCAAGGGAAT GGGTGGCAAA CTGTCGGAGA GCGGTGGAAG CTCGGGGGGC
TCCGGTTCGC CTGGCGGAAG TAATGATACC ACTACAGCCG TAGGAGCCAC GGCAGCAGCT
CTAGGCTTGA CTTCTGAAGA TGAAAATGAG TCAGAAGATG ATGAAAATGA TGATTTAGCT
CAAGATGAAG ATGAGGAGAC GCTTTACAAT GACTACGATG ACGATGATGA CTTGGAAAAC
GACGAAACCA GCAACGAAAT GCTCAATTTG ACCCGGCAAA TGATCGAAAT CAGAAACTTG
CTTGCGTCCA TCGATCATGA CGGATTGCGT TTGCCATCTA TCGTAGTCAT TGGCTCTCAA
TCTAGCGGAA AATCGTCGGT TTTGGAAGCC ATCGTGGGCC AAGAATTCTT GCCCAAGGGT
TCGAATATGG TCACAAGAAG ACCGATCGAA TTGACATTGA TCAACACACC AGAAGCTGCT
GCTGATGTCG CTGAGTTTCC CGCATTGAAG ATGCACAACT TGACTGATTT TGAACAGGTC
CAGAAGATCT TGCTCGATTT GAATTTGGCA GTTCCTGAAA AAGACTGTAT TTCCAGTGAT
CCAATTCAGA TCACCATTAG ATCGCCTAGA GTACCCGACT TGTCGCTCGT AGATTTACCT
GGTTATATCC AAGTGGAAGC TGCTGATCAG CCGTTGGAGT TGAAACAGAA AATCCGGAAG
CTTTGTGACA GATACTTGGA AGCTCCTAAC ATCATTTTGG CCATATCTGC TGCTGATGTC
GATTTGGCAA ATTCCAGTGC CTTAAGAGCT TCAAGAACTG CGGATCCCCG AGGTGAAAGA
ACAATAGGGG TAGTTACCAA GATTGATTTG GTAGATCCCG AGAGAGCGAC CAAGATCTTG
ACTAATAAGA AGTACCCACT CAGAATGGGC TATGTGGGCG TAATAACGAA GGCTCCCCCC
ACTTCTAAAG GTGGATCAGG CCTATTCTCG AGGAAGGCCA TCTCAGGATA CCAGGCTTAT
GTGGCACAGC AAAATTTTGA ACATAGCTAT TTGAAGGAAA ACAAAGAAGA CTTCTACGGT
ACTACAACTG GAACCAGAAA CTTAAAGAAG AAACTTATGA AAGTTCTTGA AAAATCGATG
GCAGCATCGT TGGCACCAAC GCATTTGGCA ATCCAACAAG ACCTAGAAGA GACATCATAT
CAGTTCAAAG TAGAATTCAA TGATCGTCCT CTTACACCTG AGATGTATTT GGCCAACAAT
ATCGACATGC TAAAGTTGGC CACAAAAGAT TTGAGCCATG AATTCTCACG TCGTGAGTTG
AAGTCGTTAT TGAAAAATGA ACTCGACCAG AAAGTGTTAG ACCTACTTGC TGAAAGATAC
TGGAATAAGC CTTTTAACTT GAAGCAAAAT CAAAATGCTC TTGTGGAACC AAATTTGAAA
GAACTTTCTC AAATCACGAA CATCGATGAC GACATATACT GGCACAAGAA ATTGGACCTA
ACCACAAGCT CGTTGACGAA AATGGGCGTT GGCAGAATAT CAACAAGTCT TGTTACAAAT
GCATTGCTTA AAGAAATCGA GAATTTGGTA GACAACACTC AGTTAAAGAA CCATCCTATG
GCAAAGAATG CCGTCAGCGA AGCGGCCAAG ACTGTTTTGG GCGCCAAATA CTACTCGACT
GCTGACCAGG TTGAAAACTG TATAAAACCA TACAAGTATG AGATCGAAAT CGAAGACAGA
GAATGGCAAG CCAGCAAAGA GAATTCCGTA AGATTGTTAA AGGAAGAAAT TAGACAATGT
GACGAGGTGT ACAATAACTT GAAGAAGCAG ATAGGAGGCA GAAAACTCCA ACAGGTGGTA
TCTTATTTGG AAAGACTAAA GCAACAACAG ACTACTGATG TTGACTTCAA TTCGCCAGAG
GCGCTTGGTT TCTCACCAAG TTTGATCCAG AGAGGTCAGG ATGCTATCTT CTTAAAGGAC
AGACTTTCTT TGCTTAAGAT GAGATACCTG TTCGTCAAAA ATTCTAAGAA GTGTAAGAAG
AAAGAAAACA AGTACCAGTG TCCGGAGATT TTCTTGGATG CTGTGGCTTC TAAGGTTACT
TCTACTTCCA TCCTTTTTTT GAATGTAGAA TTGCTTAGTG ATTTCTACTA CAATTTCCCC
AGAGAATTGG ATATGAAATT CTTTAACAAC TTGAGCAAGG AAGAAATCGA AAAGTTTGCT
AAAGAAGACC CCAGAATCAA GAAGCACATT GAATTACAAG AGAGAAAAGA CTTGTACGAA
AATGCCTTAA GCAAGATTGA AAGTGTTTTA GCAATTCAAA GAACCAAGAC AACTGGCATT
GTTAAAAACG AAAAGACTGG TGGCTCTTCA ATCTTCAACT GGGGAAAGTA A
|
|---|
| Protein sequence | MRHIGFIKIL AKTTRIPAYV GGTLAAGGSY VAYKVEQALT YTQDQLLSIK DFTQGVFDTA
GDFFKGMGGK LSESGGSSGG SGSPGGSNDT TTAVGATAAA LGLTSEDENE SEDDENDDLA
QDEDEETLYN DYDDDDDLEN DETSNEMLNL TRQMIEIRNL LASIDHDGLR LPSIVVIGSQ
SSGKSSVLEA IVGQEFLPKG SNMVTRRPIE LTLINTPEAA ADVAEFPALK MHNLTDFEQV
QKILLDLNLA VPEKDCISSD PIQITIRSPR VPDLSLVDLP GYIQVEAADQ PLELKQKIRK
LCDRYLEAPN IILAISAADV DLANSSALRA SRTADPRGER TIGVVTKIDL VDPERATKIL
TNKKYPLRMG YVGVITKAPP TSKGGSGLFS RKAISGYQAY VAQQNFEHSY LKENKEDFYG
TTTGTRNLKK KLMKVLEKSM AASLAPTHLA IQQDLEETSY QFKVEFNDRP LTPEMYLANN
IDMLKLATKD LSHEFSRREL KSLLKNELDQ KVLDLLAERY WNKPFNLKQN QNALVEPNLK
ELSQITNIDD DIYWHKKLDL TTSSLTKMGV GRISTSLVTN ALLKEIENLV DNTQLKNHPM
AKNAVSEAAK TVLGAKYYST ADQVENCIKP YKYEIEIEDR EWQASKENSV RLLKEEIRQC
DEVYNNLKKQ IGGRKLQQVV SYLERLKQQQ TTDVDFNSPE ALGFSPSLIQ RGQDAIFLKD
RLSLLKMRYL FVKNSKKCKK KENKYQCPEI FLDAVASKVT STSILFLNVE LLSDFYYNFP
RELDMKFFNN LSKEEIEKFA KEDPRIKKHI ELQERKDLYE NALSKIESVL AIQRTKTTGI
VKNEKTGGSS IFNWGK
|
|---|
| |