| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28497 |
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| Symbol | QUP3 |
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| ID | 4851273 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1368831 |
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| End bp | 1370593 |
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| Gene Length | 1763 bp |
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| Protein Length | 569 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640392981 |
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| Product | quinate permease |
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| Protein accession | XP_001387491 |
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| Protein GI | 126274259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.039744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCATG ATGATTCTCC ACCTCAGATC TACAACAGGA CTTTATTCTT ATCTGTGTTC
GTGTTTGGTA TATTAGGTGC AGCAAGAGGT TATGACGAAG GGTGCAGTAA GTATTAAATA
TTCAATTATT GAGTTTGGAC TATTACTAAC GTTAGGAAGT ATCTGGTAAT ATCACTCTAC
CATCTTTCAA ATCTAGATTT GGGCTCGCCG ATACAACGAA GTCCGCGGAC TACCTTGCCA
ATTTGAAATC CAATATCACT TCCATGGTTC AATTGGGCTC TATTGGAGGA AGTATCATTG
CCATGTATAC TGTTGATAAG CTTGGAAGAG TTAGAGCCTT GCAAGCTGTG TGTATCTTGT
GGATTATTGG AGCTGCTATC CAGGTTTCGG CCGGCTCTGT TGGACAGTTG TATGCTGGAA
GATTAATCGA GGGCCTTGCA ATTGGCCAGA CCACCACTAT TGGACCCAGT ATGACTGAAA
TTGCACCCAA TAAAATTAGA GGGCTTTGCG TCTGTATCTT CTCTGGTGCT GTTTATTTTG
GTATCTTCTT AGGATACTGT GCCAACTATG GAAGCGTTCT TCATCAGCCT AATGACTCAG
ATATACAATG GAGAATTACT GTTTCGTTGA AAATAGTTTT GGCGGGCATT ATTTTCATTC
TTTCTTTCCT ATTCTGTCTT GAAAGTCCTA GATGGTTGTT ACAGGTTAAC AGACCAGACG
AAGCCATTAA AAACTTGTCC AAGCTTAGAC ATTTACCTAT TGACCATCCA TATATTGTTG
CTGAAGTCAG CGATATAAAT GAACAAGTTT TGGAAGAAAA AGAAGCTGTT GAAAGCAGTA
ACATTTTCGA GAAGTTCAAA TCTATATTCA CTGTGAAATC ATACAGGTAC CGATTCTTTG
CAGTTTCTGC TTTAGCACAA ATTTTGGGTC AATGGTCTGG AGCTAATGCA ATTACCATCT
ATGCTTCTGA ATTGTTTAGT TTTGCAGGTA TCAAAGGGAC AGACCAATTG AAGATGTCTG
CTGTATTGGG TGTTGTCAAG TTCATTTCAG CCTATTTAAG TGCATTCTTC ATTATTGATT
TCCTCGGCCG TAGAAGGGCA TTGTACGTTG GTATCTCTGT TCAGTTGCTT TCTATCTTGT
ACTTTGCCAT ATTTATCACG ATTGTTCCTC AGGCCGATGA TGTCAACTAT GTCTTGAGTC
CCTCACAGAG CAAAGCTGCC AGGGCAGCTC TTGCTGCCGT TTTCCTTTCT GGAACAGGAT
GGACCATGGG TTTCAATAGT ATTCAGTATT TGGTTGGTTC TGAAATGTTC CCATTGAAGA
TTCGTTCTTT TGCCCAATCT TTGGTTATGG TGTTGCATTT CGGAATGCAA TATGGAAATT
CTAAGGCTGT TCCCAAGATG TTATTGGCTA TGAACAACTA TGGTGCCTTC TACTTCTTTG
TTGGTGTAAT GGTAATGTCT CTTTTCTGGG CTTGGTTCTT TGTTCCAGAA GTCACTGGAA
GATCTTTGGA ATCTATGGAA GATATTTTCA ACCTTCCATG GTACATTATA GGTAGGAAGG
GTCCTGAATT GTGTCCAGAT TACTCTGAAA TCAACAAAAT TACTCATACA ACCAGTCGTG
GTAATACTTA TGTTGACAAT ATCGCCTACA ATATCGACCA ATCCAAGATT GAACAAGCTT
ATATAGAAGA CATTAATAAC AACAAAGCTG AAAGTCTCTT GCGTCGTGAT TCTGAAGACA
AAGAAAACGA AAAGAAGCTT TAG
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| Protein sequence | MGHDDSPPQI YNRTLFLSVF VFGILGAARG YDEGCISGNI TLPSFKSRFG LADTTKSADY
LANLKSNITS MVQLGSIGGS IIAMYTVDKL GRVRALQAVC ILWIIGAAIQ VSAGSVGQLY
AGRLIEGLAI GQTTTIGPSM TEIAPNKIRG LCVCIFSGAV YFGIFLGYCA NYGSVLHQPN
DSDIQWRITV SLKIVLAGII FILSFLFCLE SPRWLLQVNR PDEAIKNLSK LRHLPIDHPY
IVAEVSDINE QVLEEKEAVE SSNIFEKFKS IFTVKSYRYR FFAVSALAQI LGQWSGANAI
TIYASELFSF AGIKGTDQLK MSAVLGVVKF ISAYLSAFFI IDFLGRRRAL YVGISVQLLS
ILYFAIFITI VPQADDVNYV LSPSQSKAAR AALAAVFLSG TGWTMGFNSI QYLVGSEMFP
LKIRSFAQSL VMVLHFGMQY GNSKAVPKML LAMNNYGAFY FFVGVMVMSL FWAWFFVPEV
TGRSLESMED IFNLPWYIIG RKGPELCPDY SEINKITHTT SRGNTYVDNI AYNIDQSKIE
QAYIEDINNN KAESLLRRDS EDKENEKKL
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