Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28422 |
Symbol | |
ID | 4851200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1181931 |
End bp | 1182716 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 43% |
IMG OID | 640392908 |
Product | conserved hypothetical protein |
Protein accession | XP_001387871 |
Protein GI | 126274186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.875052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.031565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCAA ATCTTGTCAT CTTACCGTGT CATGCTATTT GGAAAGGAGG TGCCTGTTAC GGAGAATCTG CTCAAGAATG GCATTTGGTA GACTTTCAGA AAGTAGGCTA CGACCACTTA GCATTTAAGA ACCACATCAC GCAGAGTGTT TCGTACTTGA AAGAAAACAG TGATGCTTAT CTCGTGATAT CTGGGGGTCA AACGAAAGCT GAACTGGGCC CTGTTTCTGA ATCGCTTTCG TATTATCAGC TAGCAAGAAC TCTTTATGAA CAAGAGCATT TCTTTGAAGA AGTGAAAGAA AGAATAACCA CCGAGGAGTT CGCCCGTGAT TCTTTCGAAA ACGTTCTCTT TCTGATTTGT CGTTTCTACG AGGTTTTCCA GCGTTATCCC GAAAGGATTA CTATCGTAGG CTTTGAGTTC AAGAGAGCGA GATTTCTCGA CCATCATCTC CACAGGGCCC TCAGATTTCC ATTAGAAAAG GTTGAGTATA TAGGGAACTC GCCTGATCCC AAGGACTTGG ACCAAGAAAG AAGGCAGAAG TACTTCGAAG ATTTGGATAA TAGCGAGTAC AAATTCGCGG TGAAGCATTT TGACCAGGAT TGGTATGGAA TTAATGCTCC GTTGGCGACG AAGAAGATGG GTAGAAATCC ATATAATCGA CACCATGGGT ATCAACTCAG CAATCCGGCA ATTGCTCTGT TTTTAAGTGG GGTTAATGGA AGTATACCGG TTAGTAATGA GCAATTGAGA AGTTTATTGC AAGGAGTGCC CTGGATTAAA GAATAG
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Protein sequence | MPSNLVILPC HAIWKGGACY GESAQEWHLV DFQKVGYDHL AFKNHITQSV SYLKENSDAY LVISGGQTKA ELGPVSESLS YYQLARTLYE QEHFFEEVKE RITTEEFARD SFENVLFLIC RFYEVFQRYP ERITIVGFEF KRARFLDHHL HRALRFPLEK VEYIGNSPDP KDLDQERRQK YFEDLDNSEY KFAVKHFDQD WYGINAPLAT KKMGRNPYNR HHGYQLSNPA IALFLSGVNG SIPVSNEQLR SLLQGVPWIK E
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