| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28394 |
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| Symbol | |
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| ID | 4851171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1108269 |
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| End bp | 1109819 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392879 |
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| Product | hypothetical protein |
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| Protein accession | XP_001387858 |
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| Protein GI | 126274157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0798379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTCT CTAACGATAG AGTCATTCCT CTTGCCCCCG GGTCAGAGGT CCTTGTCAGA
AGAGCCTCCG AAAGAAACGA AGACCGCACT CCACAGTTAA ACAATCTCTT CTTCAAAAAC
AGCCATTTGT CAAAGACCCA TGCTGCCATC AAGAACATCG ATGGCTCTTT CTACATCAAG
GATTTGGGTT CGACTTTTGG TTCAGTACTT AACAACAACT TCATTGTAAA GGATGCTTTC
TTCAGACTTT CAAACGGCGA CAAAGTCGGA TTCGTGATCT CGAAGCCATC AGCTACGATT
TCGCTGGTGT TAAAGAAATA CAAGACTAAG AAATTGATCC CATTGACAGA GTTCTCTTCT
CCCACTGTAG CTCTTAATTT TGAAGTCAGG ATCAGTGGCA CAGTCATTAG GTTTATTCCA
GACAAAGAAG AGAAGGCGGA GAAGGAGGAA AACGAAGATG AAAAGGAAGA AGTTACGAAA
ACTGAAACTA CAACTACAAC TGAAACCACT ATTCCTTCTT CTGCTAAATC ATCTTCCATC
TCTATCTCTG CTTCTGCTAC TCCTGGTGCT GTAGAAAGAA GGGATGATGA TGTCGCAGAA
GATGCAAATG CCCTGAAAGA TTTAGAGGAA GACGATGAAG ACGATGAAGA CTATGACGAA
GACGACTTGT ACTACTCTCA CTGTTGTCCT GGTAGTCTGG GAGTCATCCA GCGCTACGAT
CCTCCTGAAG ATTCTTTCAG CAAGACTCAA GAGTTTGATC TCTCCGACGA AGAAGAAATC
AACGCATACG ACAGTCTCCT TGGAGAAATC AACAGCAGAA GGAAGTTTGA CTCTGATGAA
GAAGACGAAG AAGAGGAAGA CGTTGACTCT GATGAAGATG CTGAAGAGGA AGATCTGCTT
ATTATCGAAA TCAGTGAAGA CAGGCTCAGT TCTTCTGAAA TATCAGAAGA TGAAGAAGAA
GTTCAAGAAG ACGAGGAAGA GGGAGAAGAA GAAGAAGAAG AAGAAGAAGA TAACGGTGAA
GATCAGGATG AAGATAATGA AGATGCCGAA GATGACGAAA TGGTCTATGT ATGCGATTGC
AGTGATTTGT TCTCTGACAA TTACAACTCT GATGGTGATG TTTTCTTGGG CAAACAAATT
TACATTGACG AAGACGATGA CGACTCCGAA GTTGATGGAG GTTTCTTTGA AGACAACACT
ACAGAATACT GTTCGTCAGA TGTAGAAGGT GAATCAGCAA ATGATATTCC AGCTAAGAAA
TCAAAGACCC GTGGCTGTAT CGGTTGCGTT CCTCCATCAT TTCAAAATCG TTACCCATGT
GGAGATTTTG CATGCGGAAT TTCAAGGAAG AGAACTTTTG AAGAAATGTC TACTCCAGAA
TTTGAAGATG AAGAGGATGA TGTCGCTGAT GAAACGAAAC CAGCAAAGAA AGCTAAACCA
TCCAGCACTT TTAAGACGAT TGTCAAAGAA GTTGCAAAAG CTTCTTTGTA TGTGTTGGCC
ACTATGACTG CTCTTGGTAT ATATGGAAGT ACCATTGCTG AACCAGAGTA A
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| Protein sequence | MLLSNDRVIP LAPGSEVLVR RASERNEDRT PQLNNLFFKN SHLSKTHAAI KNIDGSFYIK
DLGSTFGSVL NNNFIVKDAF FRLSNGDKVG FVISKPSATI SLVLKKYKTK KLIPLTEFSS
PTVALNFEVR ISGTVIRFIP DKEEKAEKEE NEDEKEEVTK TETTTTTETT IPSSAKSSSI
SISASATPGA VERRDDDVAE DANALKDLEE DDEDDEDYDE DDLYYSHCCP GSLGVIQRYD
PPEDSFSKTQ EFDLSDEEEI NAYDSLLGEI NSRRKFDSDE EDEEEEDVDS DEDAEEEDLL
IIEISEDRLS SSEISEDEEE VQEDEEEGEE EEEEEEDNGE DQDEDNEDAE DDEMVYVCDC
SDLFSDNYNS DGDVFLGKQI YIDEDDDDSE VDGGFFEDNT TEYCSSDVEG ESANDIPAKK
SKTRGCIGCV PPSFQNRYPC GDFACGISRK RTFEEMSTPE FEDEEDDVAD ETKPAKKAKP
SSTFKTIVKE VAKASLYVLA TMTALGIYGS TIAEPE
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