Gene PICST_28269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28269 
SymbolFMP29 
ID4851043 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp793149 
End bp795083 
Gene Length1935 bp 
Protein Length631 aa 
Translation table 
GC content42% 
IMG OID640392751 
Productconserved hypothetical protein, located in mitochondrion 
Protein accessionXP_001387789 
Protein GI126274029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.661194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.381664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTA GGGTTGTGAG GCAGCGCTCC AGAAGTGCTA TTTCTTCTTT CAAACTTCGT 
GCTCATGCAG CTTTTGCCGA GACCAGAATT GGAGTTGGTA TCTCGGTGCA AGCTACCAGA
CTTCAGTCCA CCAAATTGTC TGCTAATCCA GAAGAAATTT ACACCAAGAT TTCGGATTCA
GCAGATCCTA AAAGAAACCA GTTCTTCCAG TATACCTGGG GTTCTTGGTT AGAAAATGAC
AAGTTGAAGA AATCACATAG AGAAACGAGA TTTTCCATTG AAGGTGTCAG CAACTTAGTA
CAAGAGTTGA ATTTGACCAG AAAGGATCCA GCCAACGTAG ACTCCAGTGG AGAACCCTTG
CTTCAAATCA AGCCAGTCCA ACAACTCAAG GATGGAAGTT TTGTATTGAC TAACAATTTG
TCTAACAAGT TGATTGGTGA AGCCCAGGAC AAGGATGCCA AGTTGCTCGT GAAGTCCATT
GCGTCTATCC ACGAAGGTAA GCATCACAGA ATTTATAAGC TTACCCTTTC AACAGGGAAG
GATCTTGTTT TGAGAATCCC ATACAAGTTG GAGTCTGACT ACTCTATTTC TCAAAAGATT
AAAAGTGAAG TTGCAACATT GGACTTCCTT TCGTTGAAGC TCGGCTTGAA TGTTCCAAAG
GTTGTAGCAT ATGGTGACAA CAGATCCAAT GCCTTACAAA CTCCTTTCAT CTTGATGGAG
TATATTGAGG GGGACTTGTT GATGAAGAAG TGGAACCCAT TGGCTGCTGA CTCTGAGGAA
ACTGACGCTA GTTTGAAGTC TGTCATTCAG CCAATTTCTG ACTTCCAGGA CAAGATATTG
TCTGTTAACT TCAATAAGTT CGGTTCGTTG TATTTCCATG ACGATGTTAG TGTCTTGGAC
CAAGCTGATG TTCCTTACGA TGGAGAAGAA AACCCATTGT TGGTCAACAG ATGGAGAATT
GGACCAAGTA TCGAAAGACA ATTCGCTAAG AACAAGAACC ACTTATCAGA AAAGATTGTC
AAGGAGTTTA ATGGTCCATG GAAAGCTGAT GCTCCGCTTT CTTTGATTAC TTCAGTAGCC
TCTATCGAAT TGGAGAACGC TAAGAACAGA CTAGGCTTAG CCCAAGCTGA TTCTGCCAGC
AAAGTCGAGG ATGTAGAAGT CTTGAAGAAG CAAATTGAAA CTTTTGAACA CTTGCAGGCT
ATTGGCTCCA AACTTTTCAA CTCCAAATCT AAGTCAATCA TGAATGTAGA AGAATTGTTC
AGACCTAAGT TGTTTGTTCC AGACTTAGAC CCATTGAACG TCATTGAAAG TAATGACAAG
TCCTACTTTA TTGACTTTGA GTATTCGACC ATCAAGCCAT TCATCTTGAC CAGCTATCCC
AACTTCGTCG CCTATCATGG CGCCAAGGTG TACAACTTGG AAGAAGACAT TCCTGGCTTC
ACTGAAATGG ACGAAGTTGA AAAGCAACAG TATGAATTCA TGTACTACAA GACCAGAAAT
GAAAGATTGT GGGAGTTGGA ATTGAACTCC AGAAGACATG ACTTGATCGC TGTAGCTTCT
CCACATGTCA AGGTATTAAA GTCTCCATAC TTACAAGCCT TGGAATTGAA GACCGACAAG
GACTATTTGT ATGTGGAAGG TGCCATTGTG CAACTTCAAG CCATGTGGGA TGCTTATGTT
GCAAATGAGT TGTGCGGTTC TTCTTCGTCT GAATTCCCAG TGCAATACAC CGAGGAGTTC
TTGGACCGTC ATCAAACTGA CTTGGAAGAA TACCAGATCG AAACTGTTTC CAGTCCTTTT
GCCGCTACTG GAGGTTGGAT TCCACAAGAC ATGTTTGAAA CCTTAAAGGA ACAAGGCATC
ATTGTAGAAA CGGAAAACGG AAACTACAAA GTCGAAGCCG AGAAGGCCTT GGAGGAGGAG
CCAGAAGAAA AGTAA
 
Protein sequence
MLSRVVRQRS RSAISSFKLR AHAAFAETRI GVGISVQATR LQSTKLSANP EEIYTKISDS 
ADPKRNQFFQ YTWGSWLEND KLKKSHRETR FSIEGVSNLV QELNLTRKDP ANVDSSGEPL
LQIKPVQQLK DGSFVLTNNL SNKLIGEAQD KDAKLLVKSI ASIHEGKDLV LRIPYKLESD
YSISQKIKSE VATLDFLSLK LGLNVPKVVA YGDNRSNALQ TPFILMEYIE GDLLMKKWNP
LAADSEETDA SLKSVIQPIS DFQDKILSVN FNKFGSLYFH DDVSVLDQAD VPYDGEENPL
LVNRWRIGPS IERQFAKNKN HLSEKIVKEF NGPWKADAPL SLITSVASIE LENAKNRLGL
AQADSASKVE DVEVLKKQIE TFEHLQAIGS KLFNSKSKSI MNVEELFRPK LFVPDLDPLN
VIESNDKSYF IDFEYSTIKP FILTSYPNFV AYHGAKVYNL EEDIPGFTEM DEVEKQQYEF
MYYKTRNERL WELELNSRRH DLIAVASPHV KVLKSPYLQA LELKTDKDYL YVEGAIVQLQ
AMWDAYVANE LCGSSSSEFP VQYTEEFLDR HQTDLEEYQI ETVSSPFAAT GGWIPQDMFE
TLKEQGIIVE TENGNYKVEA EKALEEEPEE K