Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28269 |
Symbol | FMP29 |
ID | 4851043 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 793149 |
End bp | 795083 |
Gene Length | 1935 bp |
Protein Length | 631 aa |
Translation table | |
GC content | 42% |
IMG OID | 640392751 |
Product | conserved hypothetical protein, located in mitochondrion |
Protein accession | XP_001387789 |
Protein GI | 126274029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.661194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.381664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGTA GGGTTGTGAG GCAGCGCTCC AGAAGTGCTA TTTCTTCTTT CAAACTTCGT GCTCATGCAG CTTTTGCCGA GACCAGAATT GGAGTTGGTA TCTCGGTGCA AGCTACCAGA CTTCAGTCCA CCAAATTGTC TGCTAATCCA GAAGAAATTT ACACCAAGAT TTCGGATTCA GCAGATCCTA AAAGAAACCA GTTCTTCCAG TATACCTGGG GTTCTTGGTT AGAAAATGAC AAGTTGAAGA AATCACATAG AGAAACGAGA TTTTCCATTG AAGGTGTCAG CAACTTAGTA CAAGAGTTGA ATTTGACCAG AAAGGATCCA GCCAACGTAG ACTCCAGTGG AGAACCCTTG CTTCAAATCA AGCCAGTCCA ACAACTCAAG GATGGAAGTT TTGTATTGAC TAACAATTTG TCTAACAAGT TGATTGGTGA AGCCCAGGAC AAGGATGCCA AGTTGCTCGT GAAGTCCATT GCGTCTATCC ACGAAGGTAA GCATCACAGA ATTTATAAGC TTACCCTTTC AACAGGGAAG GATCTTGTTT TGAGAATCCC ATACAAGTTG GAGTCTGACT ACTCTATTTC TCAAAAGATT AAAAGTGAAG TTGCAACATT GGACTTCCTT TCGTTGAAGC TCGGCTTGAA TGTTCCAAAG GTTGTAGCAT ATGGTGACAA CAGATCCAAT GCCTTACAAA CTCCTTTCAT CTTGATGGAG TATATTGAGG GGGACTTGTT GATGAAGAAG TGGAACCCAT TGGCTGCTGA CTCTGAGGAA ACTGACGCTA GTTTGAAGTC TGTCATTCAG CCAATTTCTG ACTTCCAGGA CAAGATATTG TCTGTTAACT TCAATAAGTT CGGTTCGTTG TATTTCCATG ACGATGTTAG TGTCTTGGAC CAAGCTGATG TTCCTTACGA TGGAGAAGAA AACCCATTGT TGGTCAACAG ATGGAGAATT GGACCAAGTA TCGAAAGACA ATTCGCTAAG AACAAGAACC ACTTATCAGA AAAGATTGTC AAGGAGTTTA ATGGTCCATG GAAAGCTGAT GCTCCGCTTT CTTTGATTAC TTCAGTAGCC TCTATCGAAT TGGAGAACGC TAAGAACAGA CTAGGCTTAG CCCAAGCTGA TTCTGCCAGC AAAGTCGAGG ATGTAGAAGT CTTGAAGAAG CAAATTGAAA CTTTTGAACA CTTGCAGGCT ATTGGCTCCA AACTTTTCAA CTCCAAATCT AAGTCAATCA TGAATGTAGA AGAATTGTTC AGACCTAAGT TGTTTGTTCC AGACTTAGAC CCATTGAACG TCATTGAAAG TAATGACAAG TCCTACTTTA TTGACTTTGA GTATTCGACC ATCAAGCCAT TCATCTTGAC CAGCTATCCC AACTTCGTCG CCTATCATGG CGCCAAGGTG TACAACTTGG AAGAAGACAT TCCTGGCTTC ACTGAAATGG ACGAAGTTGA AAAGCAACAG TATGAATTCA TGTACTACAA GACCAGAAAT GAAAGATTGT GGGAGTTGGA ATTGAACTCC AGAAGACATG ACTTGATCGC TGTAGCTTCT CCACATGTCA AGGTATTAAA GTCTCCATAC TTACAAGCCT TGGAATTGAA GACCGACAAG GACTATTTGT ATGTGGAAGG TGCCATTGTG CAACTTCAAG CCATGTGGGA TGCTTATGTT GCAAATGAGT TGTGCGGTTC TTCTTCGTCT GAATTCCCAG TGCAATACAC CGAGGAGTTC TTGGACCGTC ATCAAACTGA CTTGGAAGAA TACCAGATCG AAACTGTTTC CAGTCCTTTT GCCGCTACTG GAGGTTGGAT TCCACAAGAC ATGTTTGAAA CCTTAAAGGA ACAAGGCATC ATTGTAGAAA CGGAAAACGG AAACTACAAA GTCGAAGCCG AGAAGGCCTT GGAGGAGGAG CCAGAAGAAA AGTAA
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Protein sequence | MLSRVVRQRS RSAISSFKLR AHAAFAETRI GVGISVQATR LQSTKLSANP EEIYTKISDS ADPKRNQFFQ YTWGSWLEND KLKKSHRETR FSIEGVSNLV QELNLTRKDP ANVDSSGEPL LQIKPVQQLK DGSFVLTNNL SNKLIGEAQD KDAKLLVKSI ASIHEGKDLV LRIPYKLESD YSISQKIKSE VATLDFLSLK LGLNVPKVVA YGDNRSNALQ TPFILMEYIE GDLLMKKWNP LAADSEETDA SLKSVIQPIS DFQDKILSVN FNKFGSLYFH DDVSVLDQAD VPYDGEENPL LVNRWRIGPS IERQFAKNKN HLSEKIVKEF NGPWKADAPL SLITSVASIE LENAKNRLGL AQADSASKVE DVEVLKKQIE TFEHLQAIGS KLFNSKSKSI MNVEELFRPK LFVPDLDPLN VIESNDKSYF IDFEYSTIKP FILTSYPNFV AYHGAKVYNL EEDIPGFTEM DEVEKQQYEF MYYKTRNERL WELELNSRRH DLIAVASPHV KVLKSPYLQA LELKTDKDYL YVEGAIVQLQ AMWDAYVANE LCGSSSSEFP VQYTEEFLDR HQTDLEEYQI ETVSSPFAAT GGWIPQDMFE TLKEQGIIVE TENGNYKVEA EKALEEEPEE K
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