| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28119 |
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| Symbol | SSK2 |
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| ID | 4850900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 373685 |
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| End bp | 377962 |
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| Gene Length | 4278 bp |
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| Protein Length | 1425 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392608 |
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| Product | Suppressor of Sensor Kinase (SLN1) |
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| Protein accession | XP_001387312 |
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| Protein GI | 126273860 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.261417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATA ATTCTGCTGC ATCTGTATCT TCACTAGCAA ACAGCACCAG TAACTTGAAC
CTCTCAACTA ACAACGCTGC CACCACCAAC AATGGCAACA ATAGTACAAC AAATATTCCA
TCTCATAATA GCAATTCATC ACTTGTAGTC AATGGCAGTA ATCCCTCTAA TAATGGTGGT
TCTTCCAGTC ATACAAATAC AGTTCATTCT TCCAATAATC ATTCCACTAC TCATTCTGCT
AGTGGTCATA CCACCAGTCA TCCTACCACT CATTCCCATA CTGCCACAAC GCATTCGCCT
ACCTCTGGGT CGAGCTCTCT TCAGAATTCT ACTGCCAACC GATCACGGTC TAGAACGCTT
TCACAGAATC TTTCGCAGAA TCACCACAAC AGCAGCAGCA GCAATAGCAA CACTCAGTAT
TTTGCACAAG AAAGAGCGTA CTTGCGTAAA ATGAAGAATC AACTCGTAGA CGACTACTAC
ACCAAAGGAA TCACTGGAGC AGATGAAGAT GCTAAGGATA ACGACATCAA CGATGATGAT
GAAGAAGATG ATGATGAAAA TGAAAGTGGG AATACGAACT TATTAACAGA CCTAGATGAC
GACAAATACC AGATTGATTT TTCCCAAGCT TTCCTGATGA TCAAGAGTAC CAACGCAAAT
TTCAATATCA ACCCTAACAA GAACGTAACA CAACTTAGTC TTGATGAAGC AGATGACCCG
GCAGTAATAG AAAGACTAGA ATGGCAGGCC ATGTTGACAT CTGTTCTTAC AGGAGATGTT
GTGAGGTCGG AAAAGACCAA GATCATTAAC AACAATAACC CAGAGAATGC CCAAGAGTCC
TTTTTGCATG CAACCTATAA GGAAAGTTTG TGGTTTGGTA TCAGAGCAAA GATATATAAT
AGAACGGAAG ACGACCAAAG GAAGATCATT GGATATAGAA GGACGTTAGT AGATCAATTC
GTGGAAGATG TTATGAACTT TGAGGTCAGC TACGAAGACC CCGTCAACAA TCCTACGAGA
AGCCAAGTTG TGAGGATAAT AGAAAGATAC GATGCAGCTT GTGGACTCTG GAGAACACTA
GAGGAGATGA AGAACGACAA ACCAGCTTGT AGAACAGAAG CATTTGTTAA TCGCATAGAT
GCCCTCAATG CTTGGCTCAC CATCACAGAT GCTATAGCTA GAGAAGCCAA TTCCTTGCGG
ATATGGATCG GTAATGATGA GTTGGATATC AGCAAGAGTC CAGCTGAGAG TTGCACTGCT
ACAACTGCAC CAAATTCAAC ATCAAATCCT GCTAGTGCTT CTGGAAGCAA CAAGCTAGTC
AAAAAGATTT TTGATGAGGA TGACAAGTCG TTGGCAGAAC GTTTAATGAA AGAAAAAGAT
GTACATACTA TATTCCGAAA GCGTATCTTC AAGCCGATAG CGCCATGGAT GATCAAGTCT
AAGGAAACAT ATATTCGACT AGGACACATG TTTGAAACCA TGAAGCTTCC TGATTACATC
CATGATTTGA TTCAAATATG TATTATACCG ATGAAGTTGA TCAAAGAAAT AATCAATGTC
AGACTTGGAT ATGCCATGAA GTTGCAGAAC CCAACGTTGA TGATGATCGA CCAGATGATA
GATGATTTCA AATCCTACAT CACCATTGCT TTAGAAGTCA AACTGGGAAT CCAAGAGTAC
TGTAAGCCAG ATGCTGGGAA GACGTGGATC CTTGGTGATC TCTTCGAAGG AGAAAACCTG
GATTTCGACC AGGTTGTCCT TCGCTGTGTG CGATACTTCT TGGTTTTGTT GAACAGAAAG
TTACTTGATA GTTCCAGATC ACCTACGACG TTCAGAACTT TCAAAGAACC AGAGGAATTG
GAGGAAGCCT GGAACTTTTT GAAGTTGCTT GGTAATTTTA TCGATGGTGG CAGTGTAGTT
GTAGCAGAGC AAATCACGTT ACTAACTTCC AAATTGATTC ATCGTTTGTT GTCGTATTTC
AACAACCAGA TCAGATCTCC ACCTTCTGGT TCAGCTTCTG AAATGATCAG ATGGTACAGT
TCAACTACCG AGAATTTCGG ACAATTGCGC CGTAAATTGG CGAGATTTAC TGGTGAAATC
TCGCGAGACT TCACAAATTC GTTGGTTTTC GATCTTCCTT CCTCTCCCAA TAACTTGACA
AAGAACATAT TGGAAGCATT AAAAGCTACT AACCACTTCT TGGTGTACAC TGGTACCGTT
GAAGGTCAGG GTATCTATTT CTTTGCCAGC TCTGAGTTGT ACGGTAATGA ACAAGAAATT
TTGAAGATAA TTAATGGTTC CTATATCGGA TTGGATCCTA ACGAAACGAA TGTCGAGTTT
TCCGTCTTGT TGAACATGAT CCAAAGCAAA GAAATCGATG AGAACTACCT TTCTCAGCCA
ATACCATCCC AGTCAAGTGA TTTTGCATAT GTATTAGCTC TTTGTCCACC TAAACCAATT
GTGTGGGAAG GGAATGTAGT TACAGTCAAG ATAGGTGAAG TTCCAATTAC AGACGTGAAA
ACGGGCCAAA TGCATTTGAT CACAAAGTTG CCATACTACA GTTTACACAT CGTGAGAGAA
AAGTTCCTAG ACATCGTCAG TGGAGTGATG ATAGTAGGTG GTACGATGAA GCCTATAGAA
CAACGGTGCT CCTTAGCTCG TGTTCACCAT GAATTGACTA AGATCAATAG AGCCTTCTTC
CGGATGTGCT TGTCAGTATT AGATTCTGTG AAGATTGTTC GAGAAAAATG TAAGGAGTGC
TGTCCGAAAG GAGATTGTCA GGCTCTTCTA AACAATTTTT TTGTCTATGC TAGGGACTAT
GGTAAGAATT CTGTCAAGAA CTTGGATTCT TCACGGAAGT CGACTGTTAT CATGAAGTTG
ATCCAACTCT CAATTGAATG GGTTAGTTTT ATTTGTGATG ACTGTATTCC TACTGACAGG
AAGACTTTTA GATGGTGTGT TTTGGCACTT GAATTCGCCA TGGACATGAC CAGAGGTTTC
AATGTCTTGG TTTTAAGCGA TGAACAATTC TACACGTTAA AATTGAAGGT TGCTCGTTGT
ATGTCGTTGC TTATTTCCCA TTTCGATATC ATGGGTGCCA GATCGAGTGA AGCAGAAAGA
ACTAGACTAT TGAAATGGAC TTCACAAAAA CATAAAATTG AAAACAGTGC AGATGACGAG
TACATCCTCA AGATGTATAA GGACGATTTG GCTAAGCAAA TCGATGAGAT TGAAGAGTAT
AGAATGGAAT TACAAGAACA ATTGCAATCG GTTGGTAGAG TATTGGATGT CACTGATCTG
GAATACCAGT TCGTCACATT GTTGGCTTCT TCCTTTTCTA GTGTTTCCAT TAGATGGCAG
AAGGGTAGGT TTATTGGCGG CGGAACCTTT GGTCAAGTTT TTGCCTCGGT TAATTTAGAT
ACCGGTGGTG TCATGGCTGT CAAGGAGATC AGATTCCACG ATAGTCAATC GATCAAGAAC
ATTGTCCCAT CCATTAGGGA CGAAATGACA GTCTTGGAAA TGTTGAATCA TCCAAACGTT
GTTCAATACT TCGGTGTAGA AGTTCATCGT GACAAGGTGT ACATTTTCAT GGAGTTCTGT
GAAGGTGGGT CACTTTCTGG ATTGTTGACT CATGGCCGTA TCGAAGATGA AATGGTGATT
CAAGTTTATA CTTTGCAGAT GCTAGAAGGC TTAGCCTATT TGCATCAGTC GGGTGTTGTA
CATCGCGATA TCAAGCCTGA AAATATTCTT TTGGATCACA ACGGTGTTAT AAAGTTTGTA
GACTTTGGTG CCGCTAAGGT AATTGCTACT AGTGGAAGAA CCAGAGCTCC AGGAGTGAGT
TCAATTGGAA CAAGACTGTC CAATAGTTCT AACCAAAACT TGAATTCTAT GACTGGTACG
CCTATGTACA TGTCCCCTGA AGTCATCACG GGATCTTCTA GTGACAGAAA CGGGGTGGTA
GATATCTGGT CGTTAGGATG TTGTGTTCTA GAAATGGCAA CAGGTAGAAG GCCATGGTCC
AACTTGGATA ACGAATGGGC TATAATGTAC CACATAGCAG CTGGCCACAA ACCTCAATTA
CCATCCCCTG ACCAATTGAG CGAAGCTGGA CGCAAGTTCT TATCCAGATG TCTTGAGCAC
GACCCCAAGA AGAGACCAAG TGCAATTGAG CTTCTTAGCG ATCCCTGGAT TGTTTCCATC
AGACAAGCAG CTTTTGGAAC ATCTTCTGAG GTTGGAACTA CACCTTCCTC CGAGATCAGC
TTTGATCCTA TCCAATGA
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| Protein sequence | MSNNSAASVS SLANSTSNLN LSTNNAATTN NGNNSTTNIP SHNSNSSLVV NGSNPSNNGG
SSSHTNTVHS SNNHSTTHSA SGHTTSHPTT HSHTATTHSP TSGSSSLQNS TANRSRSRTL
SQNLSQNHHN SSSSNSNTQY FAQERAYLRK MKNQLVDDYY TKGITGADED AKDNDINDDD
EEDDDENESG NTNLLTDLDD DKYQIDFSQA FLMIKSTNAN FNINPNKNVT QLSLDEADDP
AVIERLEWQA MLTSVLTGDV VRSEKTKIIN NNNPENAQES FLHATYKESL WFGIRAKIYN
RTEDDQRKII GYRRTLVDQF VEDVMNFEVS YEDPVNNPTR SQVVRIIERY DAACGLWRTL
EEMKNDKPAC RTEAFVNRID ALNAWLTITD AIAREANSLR IWIGNDELDI SKSPAESCTA
TTAPNSTSNP ASASGSNKLV KKIFDEDDKS LAERLMKEKD VHTIFRKRIF KPIAPWMIKS
KETYIRLGHM FETMKLPDYI HDLIQICIIP MKLIKEIINV RLGYAMKLQN PTLMMIDQMI
DDFKSYITIA LEVKLGIQEY CKPDAGKTWI LGDLFEGENL DFDQVVLRCV RYFLVLLNRK
LLDSSRSPTT FRTFKEPEEL EEAWNFLKLL GNFIDGGSVV VAEQITLLTS KLIHRLLSYF
NNQIRSPPSG SASEMIRWYS STTENFGQLR RKLARFTGEI SRDFTNSLVF DLPSSPNNLT
KNILEALKAT NHFLVYTGTV EGQGIYFFAS SELYGNEQEI LKIINGSYIG LDPNETNVEF
SVLLNMIQSK EIDENYLSQP IPSQSSDFAY VLALCPPKPI VWEGNVVTVK IGEVPITDVK
TGQMHLITKL PYYSLHIVRE KFLDIVSGVM IVGGTMKPIE QRCSLARVHH ELTKINRAFF
RMCLSVLDSV KIVREKCKEC CPKGDCQALL NNFFVYARDY GKNSVKNLDS SRKSTVIMKL
IQLSIEWVSF ICDDCIPTDR KTFRWCVLAL EFAMDMTRGF NVLVLSDEQF YTLKLKVARC
MSLLISHFDI MGARSSEAER TRLLKWTSQK HKIENSADDE YILKMYKDDL AKQIDEIEEY
RMELQEQLQS VGRVLDVTDL EYQFVTLLAS SFSSVSIRWQ KGRFIGGGTF GQVFASVNLD
TGGVMAVKEI RFHDSQSIKN IVPSIRDEMT VLEMLNHPNV VQYFGVEVHR DKVYIFMEFC
EGGSLSGLLT HGRIEDEMVI QVYTLQMLEG LAYLHQSGVV HRDIKPENIL LDHNGVIKFV
DFGAAKVIAT SGRTRAPGVS SIGTRLSNSS NQNLNSMTGT PMYMSPEVIT GSSSDRNGVV
DIWSLGCCVL EMATGRRPWS NLDNEWAIMY HIAAGHKPQL PSPDQLSEAG RKFLSRCLEH
DPKKRPSAIE LLSDPWIVSI RQAAFGTSSE VGTTPSSEIS FDPIQ
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