Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_54656 |
Symbol | HSP20 |
ID | 7204695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 605350 |
End bp | 606097 |
Gene Length | 748 bp |
Protein Length | 216 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | HSP20 |
Protein accession | XP_002185743 |
Protein GI | 219121023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.222487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACAACTCAA ACCAAGCACC ATGCGCACTA CAATTTCTAC GATCATTGCT ATCCTCGGGG CTACAGCTTT GGCTGAAGGC AGAACTCATG GGTCTGTTCT AGCCCCGCGT CATTATCTAT ACAGTCGTCC GAGAGATGCC TTCGATCTAG TAAGCGACAT GTTTTCTATA CCCTATTTCA ATCAAGACAT ACTGCCTTCG CAGTCAAACA CTTTCCTGCG CCAAATGCAT TCGCAGCTTG ATAGAGCGGC TCGTTCCGAG ACGCCCCGGT ACGATGTATA TCAGGATCCT GAAACCGGAA TGATTGAAAT GACAATGGAA GTCCCTGGAA TTCACGCTAG AGACCTCACT GTGGAACTTG AGAATAAAAG GCTTCTAAGA ATCAAAGGAT CCCGCAAATC GAGGCAAAAT GGATCGCTTC AAGAGTCAAC TTTTGAGCAG TCGTTCCAAA TTGACGAAAA TGTCGATCCC GACAACTTGA AGGTGACTCT TTCCGCTGGA ATTTTGCGGA TTCAAGCTCC AAAGAAAGAA CGCCTCGTCA AGCGCCTCGA CATCGCCACC ACTGGAGAGG AAGCGAGCTT GATGGTAGAG TCGAAGGCGG ATGCAGTACA TGACGAGTCA AAAGAAAAAA CCGTGGACGG TCTTGAGATC TCGACCGAGG ATCTTGTGTA GCTCAGGCCA CTGGACAAAG GAGCCATTAG ATTTAAGATT CTTTGCTTAA ACGCTTAGTA GAAGTATTGT TAGATGAC
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Protein sequence | MRTTISTIIA ILGATALAEG RTHGSVLAPR HYLYSRPRDA FDLVSDMFSI PYFNQDILPS QSNTFLRQMH SQLDRAARSE TPRYDVYQDP ETGMIEMTME VPGIHARDLT VELENKRLLR IKGSRKSRQN GSLQESTFEQ SFQIDENVDP DNLKVTLSAG ILRIQAPKKE RLVKRLDIAT TGEEASLMVE SKADAVHDES KEKTVDGLEI STEDLV
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