Gene PHATR_52110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_52110 
Symbol 
ID7204641 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp352861 
End bp354186 
Gene Length1326 bp 
Protein Length427 aa 
Translation table 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionXP_002185689 
Protein GI219120915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGTAAAGGCG CGCGCTTGAC CGATTCAAAC GGTGTGTCGT ACCTGGATAC GAGAAATAAT 
GTAGCTCACG TCGGACACTG CCATCCTACT GTCGTCCAAG CCGTTCAAAC GCAAGTCGCG
AAGCTTAACA CAAACTCACG CTATTTACAT CCTATTATGA CGGTTCTCGC GAGTCGGCTT
GCCGAGCTTT TGCCGGATCC GTTAGAAGTT GTTTTCTTTT GCAATTCTGG AAGCGAAGCC
AACGACTTGG CGCTACGTTT GGCCAAGGCC TACAGCTATG GTCACAGCAA CAACACGATA
GTTGTCGGTG GCGCATATCA CGGTCATACC CTAGGAACGT TGGAGATTTC TCCTTATAAG
TATGAGCACG GAACCGAATT TGCGCTCCAA GATTCGCCAG TCAATCAGAG TTCCAATGAG
TTTCAGTCAC CAGGTCGGCA CATTTGGAAA GTTCCATGTC CCGATACGTA TCGTGGTAGG
CATCGGAATC CAGCTACTGC CGCGGACGAC TACGCCGAGT ATGTTCAGGA AGCGTGTCAG
TATTTTAAGA GAAAAAACGA AAGCGTGCGG GCCTTCATCA TCGAAGGCGG CATGAGTGTG
GCTGGTGTAA TCCTCCCACC GACGGGTTAT CTATCTGCTT GTGTCAAGGC TGTGCGGGAG
GCCGGTGGTA TATACATTGC CGATGAAGTA CAAACCGGCT TTGGCCGACT AGGGACGTCA
CTTTGGGCCT TTCAACATCA GCAACACGAC AATCACGGAC TCGAAACGGT CATTCCGGAT
ATTGTTACCG TGGGCAAACC CTTTGGTAAC GGCATGCCCT TAGCAGCTTT AATTACCAGT
CGGAAAGTGG CGGATGCATT TGACGCATGC GGAGTTGAGT ACTTTAATAC TTTTGGAGGC
AATCCGGTTT GCGCCGCTGC TGGTATGGCC GTGCTGGATG TAATGGACTC TGAGCAATTG
CAAGCGCATG CTTTAAATGT GGGTTTTTAC CTACGTGAAG GACTCGTCAA GTTACGAGAA
CGGATACATC TGATTGGGGA CATTCGCGGG TCGGGTTTGT TCATAGGCGT GGAGCTAGTG
TTGGATCAAG CGACGCTGGA ACCAGCAACC CTGCAAACTT CGTTTGTGTG CTCCGTTCTA
AAAACCAAAT ACCACATTCT GACCAGCATA GATGGCCCAC ACAACAACGT TTTGGTGATC
AAGCCTCCTC TTTGTTTTAG CGAGCAAGAT GCAGATTTCC TTTTGGAGTC GCTTGCCCAG
GCCGCCACTG TGGACCTTGC TTCGGGGAGT GACTCCAATG CCTTAAGGAA ACAAACTCCA
ACTTAG
 
Protein sequence
GKGARLTDSN GVSYLDTRNN VAHVGHCHPT VVQAVQTQVA KLNTNSRYLH PIMTVLASRL 
AELLPDPLEV VFFCNSGSEA NDLALRLAKA YSYGHSNNTI VVGGAYHGHT LGTLEISPYK
YEHGTEFALQ DSPVNQIPCP DTYRGRHRNP ATAADDYAEY VQEACQYFKR KNESVRAFII
EGGMSVAGVI LPPTGYLSAC VKAVREAGGI YIADEVQTGF GRLGTSLWAF QHQQHDNHGL
ETVIPDIVTV GKPFGNGMPL AALITSRKVA DAFDACGVEY FNTFGGNPVC AAAGMAVLDV
MDSEQLQAHA LNVGFYLREG LVKLRERIHL IGDIRGSGLF IGVELVLDQA TLEPATLQTS
FVCSVLKTKY HILTSIDGPH NNVLVIKPPL CFSEQDADFL LESLAQAATV DLASGSDSNA
LRKQTPT