Gene PHATR_46929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46929 
Symbol 
ID7204756 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp844619 
End bp846338 
Gene Length1720 bp 
Protein Length300 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185795 
Protein GI219121130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.5833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGGGTAAA GAATCTACAG CCACTAATTT TTGTGAACAC AAATTCTCCA TCTCGCTTTC 
GAACTTACAA ATTCCATATC CACCGGAGTG AGACTTTATC CAAAGACATA ATGTTTTACG
GAATTCGAAG TAGCATTACG TTTGCCTTGT TGGCCCACCT TTCATCAGCT TCCGGTCGTA
CATTTACCGA CGATTTGGGA GTTACTCACA AAATTACTGG AAAGCCTAAG TTCGTGACTT
ACGCTTTAAC GGCAGTAGCT TTGCAGCATC TCGGTATGTA AGATATCTGT CAACGAGAAA
GTTGGGATGT TCATTCTTCT AAAAAGTACA ATTTGTTTTC GTGCTCGTCT CCACCAGGTC
TTGGGACAGA TCAGCTTGTA GGAACGTATG GCGAAAGAGC CGTTGCAGGG TCGGACATCG
ACTTCACTAA GTTGACTGAA GAATCTAGTT TTCCGGCCGA TCCCAACCCC GAAGAGCAAG
AATTTCTGTC TAGCGTCACC AACTTGTCTC CTGGTTGTGG TGCCGAATTC TGCCAGGAGT
TTGATATAGA AGGTTTCAGA GCACTCAAAC CAGACTTCAT CATCATGCAT GGTTACCGAC
AGGCTGTCTG GGGGCTGGAC GACCGTGTGA CGGAAATCGA AGCAGCCATA GGCAAGCCCA
TTATATACAT TGACATTTCT CTGGAGGGTC CGGAATGCAA GGAGGGATCT GGTGAAGACC
GATGCTACGG GAAATCTTTG ATTGAGGTGA TTGCGCAGTA CGAGGTACTT GCCGTCGCCC
TGGGCATCGA CATTCCCGCC TCCGTGGACG AAGATCGTCG GCGACTTTGT CAAGCATCCG
CCAATTTTCA AGAGATAGCT CGCGACGCAC ACCTTCGAGG TGTACGTGCG TTGGCAGCCT
ACTTCTCTCC ACCTGAAGGT GGCGATTTTG GTACTCTCAA CTACTTTGCT AATCCTCCCG
ATGACTTGGT TCTCCGAATG CTGGAAGAAC TTGGGCTACC GCTCTTGCAC GTCAGCTGTA
ACAGCCCCGG CGAAGAAGGT TGCGACTCTG GATATTTCTG GGAGAGTATT TCCACGCAAG
AATTCTTCAA CAACTGTACG TCCAACTTGG AAGCTTGCAA TGATCAAACG CACTATCCGG
TTGACTTTTG GCTTTACGAT CACCGCGAAT CGACAATGGT TACAGGACCG AATTTTTTCG
ACGCATTCCC CGACAAGGCT ATCGGTGCAC GTCAATTTGC CTATTGGCCA ATAGGAGCGG
GAACGGTTTC GTACCGTCAT GCAGCCGAAA TTCTTGAACT CATCGCTCCC GCACTCGACA
AGGCCGACCG CCTGCACCCG TCTACGTCGT GCACGCCCGG AGTGGATGTG AGTGGTATCG
CTCACCGTGT CGTTGGACTA GAGGGTGGGG AGTATGCCTG TTATGACGAA AAGTTTCATC
GCCAAGCATA TTTCGAATGT CCTGCGTCCA GGAATAGTGA AAGTGGACTC AATGGCGGAG
CAATGACCGG TATTGTGATC GGTGCCGTCG TGGGCTTCGC CGTGTTGGTA TTGATCATCC
TGAAGAGCCG CAAAACCCGT CACACTGCAT CCGAAAAGGA AAGTTCGGTC ACATCGGGAG
AAGAATTCCC AACGGGTCAA ATTTATTGAT TGCCGCATTG ACTGAGATTG CATTTTTTGT
CTCTGTTTGT TAATCAGTTT TAACTTTTCC GTTTTTCTGT
 
Protein sequence
MFYGIRSSIT FALLAHLSSA SGRTFTDDLG VTHKITGKPK FVTYALTAVA LQHLGLGTDQ 
LVGTYGERAV AGSDIDFTKL TEESSFPADP NPEEQEFLSS VTNLSPGCGA EFCQEFDIEG
FRALKPDFII MHGYRQAVWG LDDRVTEIEA AIGKPIIYID ISLEGPECKE GSGEDRCYGK
SLIEVIAQYE VLAVALGIDI PASVDEDRRR LCQASANFQE IARDAHLRGV RALAAYFSPP
EGGDFGTLNY FANPPDDLVL RMLEELGLPL LHVSCNSPGE EGCDSGYFWE SISTQEFFNN