| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46871 |
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| Symbol | rbcMT |
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| ID | 7204426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 673431 |
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| End bp | 675249 |
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| Gene Length | 1819 bp |
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| Protein Length | 575 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I |
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| Protein accession | XP_002185762 |
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| Protein GI | 219121061 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.139312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTCT CGTCCCAAAC TCTGCTGGTG CTGTGCGTTG CGGTCACCTG TACGCAGGCC
TTTACACCCT CGCAACGAAC GTTGCGGAAC CAAAGGCTCG CCATGGCGGT CGACAGCGGT
GACAGCGAAT GGTCCAAAGC GCTCCTGGAG AACTCTGGTT CCCAAATCGA CGCCTTTAAC
AAAGAAATGA AGCTCAAAGG TCTCATGCCG GAAAAGAACG ACGCCAATCC CAAATTCACC
GCCAATACCA ATCTCATACA ATGGCTCACG ACGGAAGGCA ACGTCTACCT TTCCGAAGAA
TCTTCCTGGG GCGAAGCACC GCATCCGCTG GCGATATCTA CCGAGACCAA GGACGAAATC
ACTAACGAAA GCTCCGGACG GGGTTTGCTC GCGCGTCGAG ACATTAACGA CGGCGACGAA
CTCTTGCGAA TTCCCATGGC CCTCTGTATG ACCAAGAGTG CCGCACGCAA AGCTGTCGGG
AAGGACGTAC TACCGTCCGA AATTAATGAA TATCTCGCCA TGGCGTGCCA TTTGATTTAC
GAACGGAATG TTCGAGGTGA AGAATCGCCC TGGAAGCCGT ATCTGGATGT CTTGCCGGAT
ATTGACGAAG TCAACCCGAC CTTTACCTGG CCCGACGAGG ACTTGGCTTT TTTGAACGGC
TCGCCCGTCA TCGCCGCAAC CAAATCGTTG CAAATGAAAT TACGCCGTGA ATACGACGCA
TTGCTAGGCG GGGAAGACGG GCTCCTGGCG AAATACCCTG ACCGATTCCC CGCCGAGGCA
TTCAACTTCA AAGCCTGGGA GTGGGCCTTT ACCATGCTCT TTTCAAGAGC CATTCGGCTG
CGGTCTTTGA AGCAAGGTGA AACGCTGGCG CTCGTCCCGT ATGCGGATCT GATCAATCAC
AGTCCATTCT CCCAGGCCTA CATTGATGCT CGGCAAAACG GCGATTGGCT CTTTAAGTCC
GGCGACGAAG AAGTGATTCT GTACGCGGAT CGCGGCTACC GTCGCATGGA ACAGATTTAT
ATTTCGTACG GTCCCAAATC TAACGCCGAA TTGCTCCTAC TCTACGGCTT TGCCGTGGAA
CGTAACCCGT TCAACTCTGT CGACGTGACC GTTTCCATTG CACCCCGTAC CGCATCCTTC
GTCAAGGAGC TCGACGACGA TACCATCCCC GTTGACCCGC TGGCGGAAGA AAAGGCCGCC
TTTCTGGAAC AAGTCGGTCG AGATGCGACG GTCGACTTTC CCTGTTACGC CGATCGGTAT
CCCGTGGAAA TGCTCGAATA TCTCCGACTT ATGCAAATGA CGCCGGAAGA TACGCGCGGC
AAACCACTCG CGGAATTCGA TTATTCCCGC ACCATTTCGC TGGGCAACGA AGCGGCCGTC
TTGACTTCCG TAATTACCGC CGTATCGCGG CAGTTGTCGA ATTACCCGCA AAGTGAAGAG
GACGATGCCG CCCTTATCAA AGACAAGTCC CTCTTCCGTC TCTTGTCGTA CAATCAACGC
ATGGCGGTCC GGCACCGCCG CAACGAAAAA CGCCTGCTAA AACGAACGAT CGCCGCGCTC
GAAAAGCAGC TCCAACAACA AGGACTGGAT GTCGAAGATT TGGCGCGCGC CGAAGGTAGC
ACACTGGGGC AGGTCCTACC AGGAGATCAG CGTAAGTACG GCATGAAGCA AAAGACGTCT
CTGGAAGATC GATTGCAAAA GATGGGACTG CCGGTCGACT TGCGATAGAA ATACAAATTC
ATGTACCTAA ACGATAGTAT GGATGATGGG ACTAATTGCA CTGTAATTGT AGAACCTTGT
AAGAGGAAAA AATGATCTT
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| Protein sequence | MRFSSQTLLV LCVAVTCTQA FTPSQRTLRN QRLAMAVDSG DSEWSKALLE NSGSQIDAFN
KEMKLKGLMP EKNDANPKFT ANTNLIQWLT TEGNVYLSEE SSWGEAPHPL AISTETKDEI
TNESSGRGLL ARRDINDGDE LLRIPMALCM TKSAARKAVG KDVLPSEINE YLAMACHLIY
ERNVRGEESP WKPYLDVLPD IDEVNPTFTW PDEDLAFLNG SPVIAATKSL QMKLRREYDA
LLGGEDGLLA KYPDRFPAEA FNFKAWEWAF TMLFSRAIRL RSLKQGETLA LVPYADLINH
SPFSQAYIDA RQNGDWLFKS GDEEVILYAD RGYRRMEQIY ISYGPKSNAE LLLLYGFAVE
RNPFNSVDVT VSIAPRTASF VKELDDDTIP VDPLAEEKAA FLEQVGRDAT VDFPCYADRY
PVEMLEYLRL MQMTPEDTRG KPLAEFDYSR TISLGNEAAV LTSVITAVSR QLSNYPQSEE
DDAALIKDKS LFRLLSYNQR MAVRHRRNEK RLLKRTIAAL EKQLQQQGLD VEDLARAEGS
TLGQVLPGDQ RKYGMKQKTS LEDRLQKMGL PVDLR
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