Gene PHATR_46728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46728 
Symbol 
ID7204632 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand- 
Start bp297555 
End bp298264 
Gene Length710 bp 
Protein Length186 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185856 
Protein GI219121258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.115026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGGACTAAA ACTGGTGTCA TGTTTGCAGC CTCTCGCTCC GCTCTTCCAT TTATACGCCG 
CTTACCGGTA CAGCCTAGCA TTCGCTTTTT TGCGGCGCAG AAAGAAAGAC CTTTTCGTAT 
TCTCGGCGTC CAACAGGTTG CTATCGGGGC CGTGGACAGA GAGCCGCTGC ACGCATTGTG 
GAAAGGTATC TTTGGCTTAA AAGCAGAGTC TTCCGTTCGC ATCGAAAGCG AGAATGTTGA 
AGAAGATATC GTTCAAGTTG GACCAGCGCC CTTTGCGGTC GAAGTTGACT TGATGACACC 
GATTGATCCT GAGAAGTCGC CAAAGGTAGG CCCACGTAGT CTTCTCCTCT ATTGTGGAAC 
ACTGTCTCTG TATTTCGTTT TCTTATCTTG CTGAACAATA AAGGTTCATA TTCCTCCTCT 
AAATCATATT GGCTTATGGG TAGACCATTT GCCAAAAGCC GTAGAATGGA TGACGAGCGA 
GGGTGTCCGC TTTACACCAG GCGGCATCCG ACGAGGAGCT GCCGGTCACG ACGTGGCCTT 
CATTCACCCC AAGGGCAATG ACGCAGCCCC CATTTCCGGT AATGGCGTTT TGATTGAACT 
TGTCCAAGCG CCCGATAGAG TCATCCATGC CATTCAAGAC TACGGCGAAT CGTCTTAAAA 
TGCCGGTGAA AACCGCTTCG ACATATCTTA AGGAAAGACA ACAATGCTCA
 
Protein sequence
MFAASRSALP FIRRLPVQPS IRFFAAQKER PFRILGVQQV AIGAVDREPL HALWKGIFGL 
KAESSVRIES ENVEEDIVQV GPAPFAVEVD LMTPIDPEKS PKVHIPPLNH IGLWVDHLPK 
AVEWMTSEGV RFTPGGIRRG AAGHDVAFIH PKGNDAAPIS GNGVLIELVQ APDRVIHAIQ 
DYGESS