Gene PHATR_46721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46721 
Symbol 
ID7204505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp278162 
End bp279189 
Gene Length1028 bp 
Protein Length325 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185675 
Protein GI219120887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACAATGGA AGACCTCTCG ACTGCATCCC CCATCCTGGT GGCTTCGGCT ACCGCAACAA 
CGGGTACTGC TACCGTTAAG GCCTTGTCGG ACATGGGAGC GTCGGTGCGT GCAATGGTCC
GCAAGGTCGA TGATCCGCGT GCCGTCGAGC TCGCTAAACT GCCCGGCGTG TCGCTGATCG
AAGCCGACTT TGACGATCAC GACAGCGTCA AGGCCATGTT GAAAGGTATC CAGCGTGCGT
TACTCGTGAC TGGTGCCTTT GCGTACGAGC AGTTCGAACG GGAGGCGTTC TTTATTGAGG
CTGCCCACGC CGAAGGCGTC GAATGCGTGG TGCGGATTTC CACGGGGAGC TTCCTGATCA
AACCCGGAAC CAAAGGCGCC TACGGCCGCA CTCACCATGG ACTCCAGGCA TTTTGTGACG
TGGGTGGATA TCCCGTCGTA CATCTTAATC CCAATTGGTT CTTTACCAAC TGGATGGGAT
CTGCCGCCGA AGCCCGAACT ACCGGGACCA TTACCCAGCC AGTCAAAGGC GACGGTCCTC
CGATGGCCAT GATTGACCCC CGGGATATTG GCACCGCCGC AGCGACTATT CTCACGCAAA
CAACGGAAGG TCTCCAGCCT TTTCTCACCA AGAAATACAT TGAAATCCAC GGCCCAGCAA
TGGTCAATTT TGCCGACAAG GCCGCGGCTT TGAGCAAAGC TCTCGGTTAC CCGATTACGA
TCAATACGGT TCCCCGTGAA GGCTTTCTCC AGGCACTCAT GGGTATGGGT CTCCCCCGTG
TCTTTGCCAA CAGTTTTTTG GAAACAATCG AACAAGTGGA TGGTGTGGTG CCCCCTGGAT
ACGAAGGCTA CGGACCGGAC TTGGGTCGCG ATGCCTGGCC CGTCGAGTCC AGCCCCGAGC
TCTTGGCCGT CTGGAAACCG CAGTACGATG TCAACGCGTG GGCTGCTTCG GATGCCGTGC
AAGCCGCGTT CAAGCGCACC TAGGAGGAGC AGAAACGTAG ATAAATTGAC TTAAGGGCCA
GTATCCCC
 
Protein sequence
MEDLSTASPI LVASATATTG TATVKALSDM GASVRAMVRK VDDPRAVELA KLPGVSLIEA 
DFDDHDSVKA MLKGIQRALL VTGAFAYEQF EREAFFIEAA HAEGVECVVR ISTGSFLIKP
GTKGAYGRTH HGLQAFCDVG GYPVVHLNPN WFFTNWMGSA AEARTTGTIT QPVKGDGPPM
AMIDPRDIGT AAATILTQTT EGLQPFLTKK YIEIHGPAMV NFADKAAALS KALGYPITIN
TVPREGFLQA LMGMGLPRVF ANSFLETIEQ VDGVVPPGYE GYGPDLGRDA WPVESSPELL
AVWKPQYDVN AWAASDAVQA AFKRT