Gene PHATR_46712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46712 
Symbol 
ID7204622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp262617 
End bp263597 
Gene Length981 bp 
Protein Length276 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185670 
Protein GI219120877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.312429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG AGACACGAGT AGCTACTATT GCAACTGAGT CGAAAGGGAA AGATGGCACA 
AAGCGCAAGG CCGCTCCCAT CACGTTGGAC GGTGAAAAGC CACAGAAAAA GTTTTATCGT
CAACGCGCAC ACTGCAACCC GTTGTCCCAC AACGATTCAT TCGACTATCC AGTCAAGCCT
CTTGACATTG ATTGGACCGA AGATCATTTT CCTGGTCTGG AGAAAGGAAG CGTTCCCACC
GTACTTGATA TCGGATGTGG ATTTGGTGGC TTGACAATGG CTCTCGCCCC ACTTCTACCA
AGCCAAATTG TTCTTGGCAT GGAAATTCGT GCTAAGGTAA CTGAATATGT GCGCTTACGC
ATTGTAGCTG CTCGGAAGGA GCAAGAAGGA AGGTACAAGA ATGCCAGCGT GTTGCGGACA
AACTCGATGA AATTTCTGCC CAATTTCTTT GGTAGGTCCT CTCTCGAGAA GCTCTTTTTC
TGCTTCCCGG ATCCGCACTT CAAGCGGAAA AATCACCCGC GTCGTATCGT TTCGGAGCGG
CTTCTGTCCG AATATGCATA CGTACTCAAG CCATCCGTAG GGCGTTTGTA TTGTATCACT
GACGTTAAGG AACTGCACGA ATGGCATGTG GAAAAATGCG AAAGACACCC GTTGTTTCGA
CGTGTTGAAG ACGAGATTGC GGAAATTGAC CCGTGTGTAC AAGCCATGAA AATCGAAACG
GAAGAAAGTA AGAAAGTGGC CAGGGCCGGG GGCGAGAAGT ATTACGCGGT CTTTGAACGA
ATCAGTATCG ACCAGGCGAC GGAAATTACC TCTACCAATT TCTTTCATTG ATAATGAAGG
ATGCAAACAA TCACATACTC TGCCGGTTTT ACAGTAAGTA GGTCGACCTC GATACGTGCA
CTTGCCGTGT CGATTAGATG CTGACGATGG ACACGTATGG CATATGCACC ATCCAACTAG
AAATTGTTTG CAATACTGCT G
 
Protein sequence
MTTETRVATI ATESKGKDGT KRKAAPITLD GEKPQKKFYR QRAHCNPLSH NDSFDYPVKP 
LDIDWTEDHF PGLEKGSVPT VLDIGCGFGG LTMALAPLLP SQIVLGMEIR AKVTEYVRLR
IVAARKEQEG RYKNASVLRT NSMKFLPNFF GRSSLEKLFF CFPDPHFKRK NHPRRIVSER
LLSEYAYVLK PSVGRLYCIT DVKELHEWHV EKCERHPLFR RVEDEIAEID PCVQAMKIET
EESKKVARAG GEKYYAVFER ISIDQATEIT STNFFH