Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46692 |
Symbol | |
ID | 7204492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 205610 |
End bp | 207332 |
Gene Length | 1723 bp |
Protein Length | 566 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185653 |
Protein GI | 219120843 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCTTGCATT TCGAAAACGG TCATGACGGA CCTATTACAA CTTGGCAATA TTGTAGATAG CCTTCAACAA CCATTACTTG CTTCGAAAGA TTGTGTCTTG GACCGTTGGA TCATGGCTCT TCAGGAAGAA GAACAATTGG GAATTGAAGC CAACGATGAA GATAGTATGC TTTCCAACAC GATCAGAGAA CTGGACGGTC TCGATCGAGT TCAAGACTCA ACCAATGTTA GCATGTCTCT TGAAAGCAAC CATTGGTACA GTAACGATAT GTTGATAATT GCCATGCTGT CCAACTTTTC GACATCCTAC AATGTTGTGA ATATCTCGCT CGTGCTACCC ATTCTGCAGC AGGTAACAAA TACGTCATCC ACCAAAGACG CGGCTTCCGT AGCTTCGTCT CTCCTGGCCG GTATGATGTT TGGACAAGTT TTTGGCGGCG CACTGGGGGA TTATCCTCGT CTTGGTCGTT TGGGAGCCTT GCGACTTGTG ATGTGCCTTC AGCTCGTCGC TAGTTTGGGT TCCGCGTTCG TTGATACTTC GGGTACTGCC ATACTAGATG TTTACGATCA ATTGACGCTG TGGCGATTTC TACTAGGAGT TGGAGCCGGT GGCGTGTATC CTCTTGCAGC GGTACTCAGC GCCGAACAGG GAGAATCGAC GGACGCGGAG TCGCTACATC GAGTCGTTTT GACCTTCAGC ATGCAAGGCG TCGGATTTCT GACCGTACCC TTACTTACAG TTCCACTGTT GTACACGGTC TCGAATCTCA ATACCGTTTG GCGAATAATT CTGGGCTTGG GAAGTTTACC AGGCTTTGCC TTGCTGCTTC TCCAATGGCA CTGGTACCGT AAGCAGCAGA CGGGGGAAAT ATTGCCGGCG AGCGATCCGG AACAGGATGC AGCATTCGGG CAAGAATCCA GCGCTCTTCA AGACAGTGAT GGGGAAGTTG GGACGTGCTT GGATTCTAGT CCAAACCTAG AGAATGACTC GGGAAGTGAA AGCACACAGA TTGTGATTCG ACATGGTTGG TTGGGCTCCA TTCGACATGA AGACCATTTG TTTTCCAAGT TGATGGGTAC AGCTGGTGCA TGGTTCTTGT TTGACGTGCT CTTCTACGGG AATACACTCT TCCAACCCAT TGTTCTGGAA GCAGCCTTTG GGACCCCGGA AACGTCGAAT GCTCGCCAGC TGCTGCAACG CACAGCACTG AATTCTCTGT TTCTTACCAG CATTGCGTTT CCAGGTTACG CTATTGCTGA TCTCGTCATG GGTAAGAAAA CGCTTGGCGT AACGCAGACA CCCCGGTATG TCATGATGCA AGGCTTTACT GCCATGTTTC TCCTTTACTT GACAATAGGT GTCTTTTGGA GGGGCCTCAA GCACTATCCA GTTGTCCTGG TAACACTATA CGGCTTGACC TTCTTCTTTG CGAACTATGG CCCCAACACC ACCACGTTTG TTTTACCAAG TCTTGTGTAC TCGGTTGAAT GCAGATCCAC CCTCAATGGA ATCAGTGCCG CCGCCGGCAA ACTCGGGGCT TGGACAGGCG CCACTCTATT TGCACCAGCA GCCTCTAGAT ACGGCAACGC CACCGTAATG ATTATGTGCG CGGTCGTTTC AGTCGTTGCG TTGGCTCTTA CAAAACTCTT CGTAAAAGTG AAAGCACCGC ACGGTCACCA TCACGCAAAT CATTCTGCGA TTTCACCAGA AGAAATACAA TGA
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Protein sequence | MTDLLQLGNI VDSLQQPLLA SKDCVLDRWI MALQEEEQLG IEANDEDSML SNTIRELDGL DRVQDSTNVS MSLESNHWYS NDMLIIAMLS NFSTSYNVVN ISLVLPILQQ VTNTSSTKDA ASVASSLLAG MMFGQVFGGA LGDYPRLGRL GALRLVMCLQ LVASLGSAFV DTSGTAILDV YDQLTLWRFL LGVGAGGVYP LAAVLSAEQG ESTDAESLHR VVLTFSMQGV GFLTVPLLTV PLLYTVSNLN TVWRIILGLG SLPGFALLLL QWHWYRKQQT GEILPASDPE QDAAFGQESS ALQDSDGEVG TCLDSSPNLE NDSGSESTQI VIRHGWLGSI RHEDHLFSKL MGTAGAWFLF DVLFYGNTLF QPIVLEAAFG TPETSNARQL LQRTALNSLF LTSIAFPGYA IADLVMGKKT LGVTQTPRYV MMQGFTAMFL LYLTIGVFWR GLKHYPVVLV TLYGLTFFFA NYGPNTTTFV LPSLVYSVEC RSTLNGISAA AGKLGAWTGA TLFAPAASRY GNATVMIMCA VVSVVALALT KLFVKVKAPH GHHHANHSAI SPEEIQ
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