Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44250 |
Symbol | |
ID | 7204149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1455051 |
End bp | 1457666 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186533 |
Protein GI | 219114706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTCTG GGAAATGGTC AAATCATCAA ACACGCCTGC GGCGAAAGCG TCCCTTCCCC AGTTATACGT CTTGTCTTGC TTTCTCAACC ATTTCCGTGA CTGCAGTCGC TTTTTGTGTG ATTTATTTGC TCTTCCATAC CGTCGCCCTT CACGTACTGA GTAATTTAGG CAGGGAGAGT GATCATGTGT TCGCAGCTCT ACAGCATCAA TCCCTTCTCA GGGAGGAAGT GGTAGCGACG GGAGCGGCAC TTTTAAGCGT TCCAGACTAC CCCGCACTTC CCAAAAAATC TGATATTACT GTCACAGACT GGCATCAGAA GTTTGTAACT GTCGGTACGG AGCAAAGTGG GGTATTCAAT GCGGTTACGA TTGATACCAA ACGAGCTGAA TCATTTTTGA TTACTCATGG AGCACAGGCT ATCCGCAAGC CTCTTAGTGC TTATTTGGAA CCTGGTCTGA ATGACATTGT CCCAGGCACC GGATCGCGGG GGGACCACAA AAATCCGAAA GACTTAGGAG TAGCCCCCGA AATTTACACG CCGCTGCCTC TCCGTACCCA CACGCCTGAT GCCTTACGAA AGGTAGAATA TCCGCGAGTA CAAACCTGTC ATGATATGCC GGGAAAATTT CCTATCGATC GAGGCCTAGA ACTGGACAAA GATGGTCTGC CAATTGTTTG GAATGTCGGC GATACACTGA CTCCCGACGA CTTTCCGGAA CAAGAAGTTC CATTCTGTCC TGTGGAAGCC GATCCCTATC TGCCTTGGAT TCACGATGTT TTCCCTAGTC CAGATGGTAC CAGAGTTCAT TTCATCGCAC AAAATCGGCG GCGGTGTCGG ACGGGTAAGA ACTTCTCACG GGAGGTCAAG CGTCTCGCGC CACAAGTAGC GTTGATGCAG TCTGTCAGTG TCGAGCGGAT CGACGAAGTC CGGGCGCGAT TTCTAGCGCC GAAGCTTTGG CATCCGGAAT ATGTGAATAA CACTTCTTCT CCGCCTCGTT ACCGCCTCGC CCCGTACGAG GAAGCATCAC CCGACGGATT GTTCACTAGA TTTATTTGTC GTTTCCATGC CATCGATTTT TCATCAGGCC ACCCGAGAAC TGTCACTTTA GGCGAAACCC TAAGCGAATA CCCTTTCAAC TACGAAATGG CTGCCTACCG CAAAGGCTGG TATCGACTCT TGACGCCAAA AGGCAAGGAT AGTCGATTTT TTTGGACAAG CAACCTTCGT TTTGATTGTC CTCTCCCTTT AAACGCCACC TCAATACACC GAATGATTTC TAGTGGAAAC TCAATCCTTA GCGACGGCAC CCCGACTGTA CACCTTGATT TAGTTCCTAT TCGATCCAGT GTGCGGTACA ATGAGCATTA CTTGACTGAA GACATGATTG GACCGAAAGA AAGATGGGCC GCGAAGGGAT TCGATCCTGG AAAGCATTGG GGCAAACAAA GTGTGCTCCC ACGAATAGAG GCGAGTGGAA GATGGGAAAA CATTCCAATC TGCCATCCAC CAACACCCAA CGGAGGCGAT GTTGACAAAA AGTCTTACGA GACACATCCG ATCTTAGAAT CACCTTCAAA ACCATCGAAG CCAAACTTTC TGTCGGCGTG TCTTTGGGCG TCAGCAGAGT TCAAAACAAG AGGCGTAAAA AAAGGAGCCG ACACAGATAC TATTTCGCGT CTGAAGGAAT GGATAGAATT TCACTTGATG GTGGGTTTCG ATCACATTTA TGTTTATGAC AATACCGGGG CCCATACGAA TGCTACCTCA TTGGAGTCGA GCCTTGCTAA GTTTCCGGGC AGGGTGACAC GGATTGATTG GCCGAGTATC GTTTGCAACA ACAATATACC AGCTCATGAC TCAACAGGAG AACGTTCCAG TCAGTATGCT GCCGAAAATA GCTGCCGAAC TCGATATGCC CCATTTACCG AGTGGATTGC AGCCTTTGAC ACGGACGAGT ACTTCGTGCC GATGGGAAAT TATACCAATT TAAAAGATGT CTTGCTGAAT GCTGGAGCTC AGGGTACCAA CATACTTTCC TTTCGGAGCT CGCGCGGCTA CCTTCGCCAA GAACACAGTG TCAGTGTTGA CGACGGAAGG GCCCTGGAAA AGTCCGAGAA TAAGACATTT TTGGAAGCTT ATAACTGCGA CTCTGCTGGT AGTCCCAAGC CGTCCTGGGC TGAACGCGCG AGAAAACAGA TTTACCGAGC AGACTACGTT CCGTATCATT TTGTGCATTA CTCGACCGTT ACGAAAGGGC TACTAAAGGA GTACAAGGAC CAGATCAACG GTACATGGTC AAGCAAGTTT GGAGAAAGAG CTCCATCGGA GCGAGTTACA GATGAGTTGC ACGAAGCTGT CATGGTACAC ACAAAGACTA TCAAGCGCGA CATGACCAAT CGTTACAAAA GACGATGTCG CTTTGACTAC GACAAGAAAT GGCAAGGTTG CACGGTTGCG TATCCTTGGC CAAACGGTTC CGTAGGGAGT GGCAAGGAAA CTTATGATGA AAACGGAATG GAGTACAACT GTTTTGTGAA CAGAAAAGTT GACGATCATT GGGTTCCCAA ACTTCGTGAA GCGATTCTTC ATCGTCGACT GGCACAGAAC AGCTGA
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Protein sequence | MVSGKWSNHQ TRLRRKRPFP SYTSCLAFST ISVTAVAFCV IYLLFHTVAL HVLSNLGRES DHVFAALQHQ SLLREEVVAT GAALLSVPDY PALPKKSDIT VTDWHQKFVT VGTEQSGVFN AVTIDTKRAE SFLITHGAQA IRKPLSAYLE PGLNDIVPGT GSRGDHKNPK DLGVAPEIYT PLPLRTHTPD ALRKVEYPRV QTCHDMPGKF PIDRGLELDK DGLPIVWNVG DTLTPDDFPE QEVPFCPVEA DPYLPWIHDV FPSPDGTRVH FIAQNRRRCR TGKNFSREVK RLAPQVALMQ SVSVERIDEV RARFLAPKLW HPEYVNNTSS PPRYRLAPYE EASPDGLFTR FICRFHAIDF SSGHPRTVTL GETLSEYPFN YEMAAYRKGW YRLLTPKGKD SRFFWTSNLR FDCPLPLNAT SIHRMISSGN SILSDGTPTV HLDLVPIRSS VRYNEHYLTE DMIGPKERWA AKGFDPGKHW GKQSVLPRIE ASGRWENIPI CHPPTPNGGD VDKKSYETHP ILESPSKPSK PNFLSACLWA SAEFKTRGVK KGADTDTISR LKEWIEFHLM VGFDHIYVYD NTGAHTNATS LESSLAKFPG RVTRIDWPSI VCNNNIPAHD STGERSSQYA AENSCRTRYA PFTEWIAAFD TDEYFVPMGN YTNLKDVLLN AGAQGTNILS FRSSRGYLRQ EHSVSVDDGR ALEKSENKTF LEAYNCDSAG SPKPSWAERA RKQIYRADYV PYHFVHYSTV TKGLLKEYKD QINGTWSSKF GERAPSERVT DELHEAVMVH TKTIKRDMTN RYKRRCRFDY DKKWQGCTVA YPWPNGSVGS GKETYDENGM EYNCFVNRKV DDHWVPKLRE AILHRRLAQN S
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