Gene PHATR_44222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44222 
Symbol 
ID7204058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1347631 
End bp1349472 
Gene Length1842 bp 
Protein Length564 aa 
Translation table 
GC content56% 
IMG OID 
Productenhanced disease susceptibility 5-like protein 
Protein accessionXP_002186236 
Protein GI219113305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCGTGTGG CTTTTTCACT GACAGTTACA GTTAGTGCAA TTTACGGATA CCTTCCGACG 
ACAAAACACA TTTTTACCGC CGTCAAGTAT CCGTTGCATT TACAGTTACT GTTAATCCAA
CGCAGTCCAT TGTCACCGTT GTCCAACATG CTTTGGAAAC GAGCGTCTAC CCGGACGTTT
ATCGTCTTAC TGCACCTGCT CACGTACCGA GCGGGCGCCT TTGCTTCCTT GTCATCCCGG
CAGGCTTCGT ATCGAAGTCG CGGTCCCTTG GTTCCTTCAC AATCCACACA GCGAGGTCGA
GTGCTGACTA CCACCACCGA ATCTTCCGGA GACGTCCCTC GCGGTGGAGA CTTGCCCCGC
CGGATCCCCG ACCTCCCAAC GCTTGCGGAT TATCGCAAGT TCGCGCTGCC CTGTCTCGCC
CTGTGGATCG CAGGGCCCTT GCTGAGCCTC GTCGATACTT CGTTCATTGG ACTTTCGGGA
TCCCCGGACC TCTCGGCGAA CAATTTGGCT GCGCTGGGAC CCGCGACAAC CTTCTTTGAC
GGCGCGACCT ACTTATTCGC CTTTTTGAAC GTCGCCACCA CGAACCTGTA CGCGTCCGCT
CGATCGCAGT CGGGCCCCAA TAGTCCCGAA GCCGAATCCG TCGTCCGTAC CGCCTCTAGA
GTAGCGGTCA ACTGTGGAAT TGGAATCATG TTCTTCCTAC TCGCCTTTGC CCGACCCCTC
CTCAAGCTTT ACATGGGCGA CAAGGCAGCC AGTACTCCGG GACTGCTCGA TGCCGCGACG
GATTACGTCT TGATTCGGGC CCTCAGTATG CCCACTTCTC TATTATTGGG CGTCTTACAA
GCCGCCTTAT TGGGTGCCAA AGACTCCGTT ACTCCGTTAA TCGCCATTCT GTACGCCACC
GTTGTCAACA TATTTGGTGA CTTTATTCTC GTCAATCGTC TCCAGATGAG TCTGAAAGGG
GCCGCGATTG CCACGACACT GGCGCAGTGG GCATCCACGG CCGCTTTGAT TGCACCCGCG
CGTCGCAATC TCGTCAAGGA TCATTCCCTG GGATTGGTGC GCAAACCAAA ACCTTTTCCG
GGCGGAGTCA CGGGACGAAC TTTTCTGGCA TTCGCCGCGC CCGTCTTGAC TTTGATTCTA
GGAAAGCTCG CGGCCTTTGG CTTCATGACG AATGCGGCGG CGGGCGTTCC GGGACAGCCC
ACACCGTTGG CCGCCCATCA AATCATTCTC AGTTTACTCT TTTTCTGCAG TCCGTTCCTC
GAAGTCATTA GCCAGACAGC ACAAACCTTC TTGCCCTCCT ACTTGGCTCC TATTTTTGAA
CACATGGACA AACTCCGCAA GCGCAATCCC GACTACAAGC CCGAGGAAGA TCCGGCCGTA
GAGCCGTGGT TGAACACGTC CAAACTGGTG GCTACACGTT TGTTGGGCAT TGGTATGGTG
ACGGCGGCTG TCGTGGCAAG CATCGTTTCC CTCATTCCGG CTTTTTTTGG TAACTTGATC
ACGTCCGACT TGACGGTACA ACAGGCCGTC AAGCCTTTGG CGAAGTACTT GTGGATGGGT
GCCTTCTTCT GGGCCCCCGT GGCGGTTTGC GAAGGTGTCT TGTTGGCGCG TCGGGAGTTG
TCTTTTCTGG CCAGTATTTA CTTGGTCAGT ACCGCTTTGT TGCCGCCCGT CTTGCTGCGC
ATCAAATTTC GTGGGGGAAC GGTTGGTCAA GTATGGGCTT GCTTTGCCAT CTTTCAGCTG
TTCCGAGCGG CCTGTTTTAT TGGTCGTATT TGGGGACCTG GTCTGGTACA CCGCGTTCTG
GGACGCCGGC AACCGCTTCC GGCGACCGAC AGGGGCTCCT AA
 
Protein sequence
MLWKRASTRT FIVLLHLLTY RAGAFASLSS RQASYRSRGP LVPSQSTQRG RVLTTTTESS 
GDVPRGGDLP RRIPDLPTLA DYRKFALPCL ALWIAGPLLS LVDTSFIGLS GSPDLSANNL
AALGPATTFF DGATYLFAFL NVATTNLYAS ARSQSGPNSP EAESVVRTAS RVAVNCGIGI
MFFLLAFARP LLKLYMGDKA ASTPGLLDAA TDYVLIRALS MPTSLLLGVL QAALLGAKDS
VTPLIAILYA TVVNIFGDFI LVNRLQMSLK GAAIATTLAQ WASTAALIAP ARRNLVKDHS
LGLVRKPKPF PGGVTGRTFL AFAAPVLTLI LGKLAAFGFM TNAAAGVPGQ PTPLAAHQII
LSLLFFCSPF LEVISQTAQT FLPSYLAPIF EHMDKLRKRN PDYKPEEDPA VEPWLNTSKL
VATRLLGIGM VTAAVVASIV SLIPAFFGNL ITSDLTVQQA VKPLAKYLWM GAFFWAPVAV
CEGVLLARRE LSFLASIYLV STALLPPVLL RIKFRGGTVG QVWACFAIFQ LFRAACFIGR
IWGPGLVHRV LGRRQPLPAT DRGS