Gene PHATR_44159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44159 
Symbol 
ID7203902 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1141801 
End bp1143136 
Gene Length1336 bp 
Protein Length305 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186191 
Protein GI219113215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0065862 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGCCTTTGT CAAAGCCCCT CTTTTGTCAT CTAGTACTAC AACAATCGTT GTCATTTCAG 
CAACTTACCG TCAAAAGTTA ATTATTTTGT AGCCGTCCTC CTTGTCCTTT TCCTCTTGTG
CCATGAGGAA CCTGTTGCTG CTCGGGATTG TCGTAGCAGA GGTTTTTTTC CGCTCTCGGT
GTACGGCATG GATTCTGGTG AGTAGGTGGA GGACGTCTTG CACTGCGCGA GTCTCGAGAC
CGACCAGACC GAGTATCCTT CTGTTCGAAA CCGCAGAAAG CAACTCTCGT GAAAAAGATG
CGGTCACGGT CGGTCGCATC AGCAATAACA CCGCAACTAT CGATAGCAGT CGTCGACTGT
CGGCGTGGGT CGTAGAGAAT TTGGAAGCCC CGGGCTCTTC GATTACCACC GCTTCCACGC
TGCAAGCGGG AGAAAACGAT ACCTTACCCG TAGACGGTCT CTGCATTGGA AACGTTCGGG
TCCTGGCAGC AGAATCCACG TACCTCGACG ACAAAAGACA CGACGGTTAC TTTCCGGTCC
GCCTGCTGCT CGGTCGCAAC GGCTGGGGCA CCGGTGTGCA TCCTACTACG CGCCTCTGCT
TGGATTGGAT TTGCCAAACG GTGCAAAACG GCAACGTCGT TCTGGATTAC GGCTGCGGAT
CCGGCATTCT GTCGGTAGCA GCCTTGCACA ACGGTGCACG TCGCTGCATC GGTGTGGATG
TGGAAGCCGA GGCGCTGGTC ACGGCCTCTC GCAACGTACA GATCAACGGA TTCGACGACT
CGACGTTCGC GGGGTTGCAC GTGCGGGAAG TCCTACCGTA CGGGCTCACG ACGTCGAATA
CCGACAACGA CGGCGTGGGA GTTGATGTAG TAGTGGCGAA TATACTCATT GGCCAGTTGG
TCCGACCTTC CATGGTGGCG GCTATCGTGA CCAACCTGGC TCCCGGCGGC CTCGTGTGTC
TTTCCGGCAT TCGACCGCAT GAGGTGGATA GCTTGAAGGT TGCCTACGGA GAGCACATGG
AATGGCTGGA CTGCCAGTAC GCCGAATTGT CAGCGGATGC AACGCCAGGT AGTTTGCAAA
GCTACGGTTT CGACTGTGGT CGATGGTCTC GTCTGGTGGG TCGCAAGACC AGCAGTGACC
GCGGTGGCGA TATTGAGCGC ATGAGTGAAC TGGCCGTTTC GTAAAGCAAG ACTTTGGGTC
CAAGAATGTC CACTGCCGCA AGAATGATCA TCGAAACAGT TCATATATTT GTGTGCTGCA
CTGCAGGCAT GAGGGCTAGA CTACTCTTGG CCGCATATAA ATGGCTTTAA AATATCGAGA
GGATCTCCAG TATCTT
 
Protein sequence
MDSESNSREK DAVTVGRISN NTATIDSSRR LSAWVVENLE APGSSITTAS TLQAGENDTL 
PVDGLCIGNV RVLAAESTYL DDKRHDGYFP VRLLLGRNGW GTGVHPTTRL CLDWICQTVQ
NGNVVLDYGC GSGILSVAAL HNGARRCIGV DVEAEALVTA SRNVQINGFD DSTFAGLHVR
EVLPYGLTTS NTDNDGVGVD VVVANILIGQ LVRPSMVAAI VTNLAPGGLV CLSGIRPHEV
DSLKVAYGEH MEWLDCQYAE LSADATPGSL QSYGFDCGRW SRLVGRKTSS DRGGDIERMS
ELAVS