Gene PHATR_44128 details

Gene Information

• Locus tag: PHATR_44128
• ID: 7203881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1059536
• End bp: 1062780
• Gene Length: 3245 bp
• Protein Length: 360 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186458
• Protein GI: 219113749

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACAGGCACA GTGATCTTCC GGCGTGTCTT TGCTATTCGA TGCTTAGTGT TCCACAGATT 
GAGATTCTGG ACGCGTTGCT TGGTACATAA AGGCTTGATC CGGCCAAGAC AAGCAAAGAT 
TGGTGGAAAG CAACGGCATC TGTAACTACA CCATGACCTC AACCGTCCCG GATGAGACTA 
TAGAAGCGCC CACGACGACG ACGACGGCGA ATTTGCCTGC ATCAATATCA AAACTTCCAA 
TTGTATGTTT AGCGCATGGC ATGCGTCACA AAGCTAACGC TTATGAATTG AAAAATTGGG 
TCGCGTTGGC GTTGACGTTA GACGGAAGGG ATAAGCTCAC AAAAATTTTA CAGTATGTTG 
CTCGTTTGCT TTCTTGGTGG TTTGCGGGCC GGGGAAGAAT CAACCAAGCG CAGCGGTTTG 
CGTCTCTAAA AAACAGCCTC ACAACGAGTC GTAAAGCGTT TCGCATGGGA CGAAGCGTCA 
TCGAGTTTCA TCGCCTCCGG AAAATGGGGA TTTTGGAAGC ACTCGGCTAT TACTTACAAC 
AGAATTTGGA TAGGAAACCA AGAGACGAAC CGGCTGGAAA ATGTCTTGAT ACAGGCGGAT 
ACGGTAAAAA TCAACAATCG CTGGTCCCTC TTCTGAATGG TTTAGCATAC CGATTGCAAC 
AGAAGATGGC GACAACTTTT TTGCTTACTG AACCCAAACT CCCCGACACA CCACTGTGGG 
CATTGTTAGG AACAGCTCTG AAAACCCTCG GTTTAATGGG CTTCTGGGCA GCAGACAATA 
TTTCCTTTCT CATAGCCTCC GGCACTTTCG ACAACTACCG ACTAGGATCT CGAGAACGCT 
TGGAACGACG GAATAGATAC GCTAGACGAG CAAGTGCAGT AGCGAATCGA GCTTATTTCG 
GAGGAGCGGT CGCCGGCTTA ATTGTTAATG TTCGAGGATA CCTTGATCAA CGGCAGACAA 
CCCTCCACTT CTTACAGCAA CGCCGAGAGC AAACCCAGAC AGCGGATGAA ATAGATTTTA 
CTAAAAAGGG TCTGGAGAAG GCCAGAGAGA AGCACTTTGA TTCGTTTGTG GCCCTCACCA 
AGAGCGTATG TGACGTTTTG GTCTTCAGTA ACAATCCCGG TATCGATCTC TGGCAACAGC 
AGATCGGACA CAAGATGCAC GAAGGCTTCC ATTGCCTATT TGGCTTGATC TCTGCTTCCG 
CTGTCCTTTA CAATAATTAT CCGGCTGCTT GTTGACATGC AGAAACCGTA CTATTGTGTA 
TTGTAATCGT TGAAGCGTTT AGAGCGCATA CAAAATCATT CCTGGTCGTC CAAACTCTCA 
AACAAGGGCT GCAAGTACTC GACTCCACAT GGGTCATCCC GCATCTTGTA CGCAGGATCA 
TCTTTTGGGA AGTCTTTGAA ACCATTAGCC ATGGTGAATG CCTCGCTCTG GATTGCTTCT 
AGAGCCATCA ATTCCCCAAA TTTGACATGC GCCACCATCC AGAGGCGTTT ACCGAAGTTT 
TCAACACGAA GATTCTCTTG AATGTTTTTG TGGCCATCGG CAGATCCCCG AATACGTTGA 
GTGGCCGTCA ACGCCATGCG AGCAACGCAG AACCTTGTGC GAAATTCAAG GGCTTCGTTG 
GATTCCGGCA GAACATAGCT TGCATTGCCA ATATGAGCCT CTAGTTGATC CGCCGCGGTG 
CCATTGTAGT CGGTATGCGT CATGACGATC AAACGACACG TCGAAAAGAT TAAACGGGTG 
TCCATTTTCA CGGTACGTGG GTTCATCGTT GGGATCTTGC TAGTAATGGG CTGATCCGAA 
TTTCGAGCAG GCTCAGACAG CGGACTCGGA GGCTGGACGA AAACATTCCA ACGTTCAGGA 
ACCTTCAACA AATTCATCAT TAGCCTAAGC TTGCGTTGCT TGAACGCCCA AGCTTCCTGT 
TGATTCTGAT CGACGCAGGA CTGGTATCCA TCGTCATACT GCAAATAGTG AAGCGCCTGG 
ATGCCACGTG GTGTATCGTT ACCGTTCGCA CTCAACGGGC TGTGGAAGAT GGCAATACTG 
CCTTGGATGT ATCCACTGCC ATCGCCATTT ATAAAGCCGT ATTTGGCAAA CAAATGTGAG 
TCGGTGTGTT TTCCGTAAGA ATCCATGATC TCGGTTCCCA CAGGAATCGT CTTTAATGCG 
CGTACTTCGA AAACCCGGGC CTCTGTATTG TACGTAAAGC CTACGTTAGG ACGGGCATGG 
TGGTTGTAAA GATCCAGAAT CGGAACCATT GCATGCGAGC CCTTGGAGAG GTCGATGCCG 
TGTTGCGCGT ACATTTTGAG TTCCGAATCA AGAGACTGAT TCGGTGCCGC TTCGTTCGCT 
GGGAGAGGTC CAGTGCCGAA GCTACGAGTC CAAACATTCA AACGGGCAGT CTTATAGGCT 
TCGCGAGACA CTCCCTCTGT GAAGTCGACC GAAACCTCCT TAAAAGCCTC ATATTCCGAT 
TCCATTTGGT TCTGCATCGA TTTAATAGTG TCGTAAGCTG ATGTAGCCGT TAGCGCTAAT 
TCCAGCTCTT TCTGGGACCA GAGAAGAGGA TGGAACTCGG CAAAATCACT GTATTTCGGC 
AGCACGTTAA TGTAGTCGCG GTAGTGCTCC ATTGCTTCTA CATCATCCGT GTTGTTCTTT 
CGAATTTGTC CCTGGATTTG AGCCAAACGA GCAGCTAAAA CAGCACCGGC ATCGATGAAC 
TCTGGGCTCG TCTTTGTTTT TGCTTTCAAA AGCTGGAGCC CTAGATTGCT GCGCAAGGCA 
TCCAAATCCC AAAGTTGCTT GTCTCGTGGA ATTGTCACAA GCATGGTACC TTTACGAATA 
TCGTGGGATG CTTGGTGAGT TCTGCGGGTA GCCGCAAGAA CGGGATTGCA ACCTGCCTTC 
GTGTCCGACG ATGTATCCAA TTCTCCGCAG ATCGATCTCA AAAGCGAAAT CACCGTCTCG 
TCTACCCAAT CTTTCGCGAT GTGATTCCAA AATAGTGCTG TCGCCATTGC AAGAAACAAC 
ACCAAGGTAG CTTGCCAAGT AGATTCAGAC ACGCCGGTTA GACCAAACCA CGATCTTCTT 
CTTTCTCTTC AGCTTCTTCT TGATGTCTGA AGCATCGACT CCTTTGCTCT CTCCTTTGAG 
TCGGGAAACG GCCATCGTTA CCAAATCTAT TTGGGTATTT TCCGTGAAGA GTCTGGTCCC 
CCAAAAGGAT CGCCCCAGAA ATTTATGGTT GACTAGTTTA CTGCGATCCC CTCTTGACAT 
ATTTG 

 

Protein sequence

MTSTVPDETI EAPTTTTTAN LPASISKLPI VCLAHGMRHK ANAYELKNWV ALALTLDGRD 
KLTKILQYVA RLLSWWFAGR GRINQAQRFA SLKNSLTTSR KAFRMGRSVI EFHRLRKMGI 
LEALGYYLQQ NLDRKPRDEP AGKCLDTGGY GKNQQSLVPL LNGLAYRLQQ KMATTFLLTE 
PKLPDTPLWA LLGTALKTLG LMGFWAADNI SFLIASGTFD NYRLGSRERL ERRNRYARRA 
SAVANRAYFG GAVAGLIVNV RGYLDQRQTT LHFLQQRREQ TQTADEIDFT KKGLEKAREK 
HFDSFVALTK SVCDVLVFSN NPGIDLWQQQ IGHKMHEGFH CLFGLISASA VLYNNYPAAC