| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43959 |
|---|
| Symbol | |
|---|
| ID | 7204381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 548906 |
|---|
| End bp | 550057 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186368 |
|---|
| Protein GI | 219113569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCACCAACG ACTTTCTCCA GGGATTGTGT GTCCACAGCC AAGCCAATCC AAACTAGTCC
GCCACAACGG AAAAGACGAG CTGTGTAGTG TTTTTGGGTT GCCAGGGAAA GAGATACTCA
CTTTGGTTCG TTCCTTGGTT TGAAGCGACG GACTGCAAGA GCGAGCACCG GAATCCTTAG
TGCCGGTCCA ACGCACGAAC GCAACGCGGT GAGCGTTGAA CGTACACTCC GCGCTCCCTC
GTCCGAGGCT AGTCGCAATA GCTGTTAAAT TCTCCCGCAA CTCTACCGTG TCGCAACATT
CGCAACCACA CCAACCATCA CAGTTTGGTT CCAACCATCC ATCCATCCAT CCATCCAAGT
ATGGTCCCCG ATCCGTATCG AACGCTCGAT CTGCCGCACA CGGCAAGTCC GGCAGAAATT
AAAACAAGGT ATCGTCTTTT GGCTCGACGG TACCATCCAG ATCGAGTGAC GACTGCCTCC
AAGGCAGAGC AGACCGCAGC CACCGACAGA TTTTCTACGA TTGCCTCAGC GTATGCCCTG
CTTGCCGACG AACGCACGAA AGCCCAATAC GATCACGTCT ACCGGTACGG AGGCCATGAT
GTGGAGCAGC CAGTTAGCGG CTCCTCGCGG AGTACAGCAC AGCGTAGGGC ACACTCCGAC
ACTGTGTCCA GAAAAGGGAT CGGCTATACC TGCACCAATC CACTCGCGTA CTTGTGGACG
CAGGGGAAAG TGTACTCGAC CAGGACCATG GCGGGTGTCT CCTTACCGAG TCGCTTTCCA
ATGCCTGGCT CTGGGACCCA AAATATTCAG TTTGCCTTTT CGTCGGGACA ATACTACCGA
AACGGCAACG GGGAACGGCA GTATGTTTCC CGGACAACGC AATTTCTCGA CGGTAAAAAA
GTCACGCGCG TCGAGACGAC CACCATTCAT GCGGACGGGC GCCGAGACGT GACAACTGTG
GATGACGACC GGGGAACGAC AACACGACAC TTTAAATCAC CATCGCAAAA AGGATCCAAC
GCCACCTGCT CATTGCAACA AAATCAGCAG GCCTCCGTAA ACGAGCACTG GTTTGTCCAT
GCCTGGCATG ACTTCAAGGA CAAAGTGTCC ATGTGCTACA ATCCGTGCAC CGATGTGGCG
GCAGCCGAAT GA
|
|---|
| Protein sequence | MVPDPYRTLD LPHTASPAEI KTRYRLLARR YHPDRVTTAS KAEQTAATDR FSTIASAYAL
LADERTKAQY DHVYRYGGHD VEQPVSGSSR STAQRRAHSD TVSRKGIGYT CTNPLAYLWT
QGKVYSTRTM AGVSLPSRFP MPGSGTQNIQ FAFSSGQYYR NGNGERQYVS RTTQFLDGKK
VTRVETTTIH ADGRRDVTTV DDDRGTTTRH FKSPSQKGSN ATCSLQQNQQ ASVNEHWFVH
AWHDFKDKVS MCYNPCTDVA AAE
|
|---|
| |