Gene PHATR_43797 details

Gene Information

• Locus tag: PHATR_43797
• ID: 7204158
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 34311
• End bp: 35141
• Gene Length: 831 bp
• Protein Length: 225 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185988
• Protein GI: 219112809

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCCTATCAT TCAGGAAAAG CGTCTCGCAC GTATACACTC ACAACGCAGC CCCATGCAAC 
TTCACCATGC CCTACTACCC ATACACTACG ATTGCCTCGC AGCAAACACA CCATCCGTCA 
CAAAGCGGGC GGCTAGCGAG ACAAGACTTT CTACGCCAAC GTGCACAAGC GGCGGCGAGA 
GCCGCGACAG CATCGAAAAA CAGTCAACCC AATCAACAAC CAGCGGAGCT TTCGGAGAAT 
AAGTGCAAGT CTTCGTCTCA CTGTCGATAT ACCGGGTGTC TTCGCTCGTG ATTTGGAAGT 
GGCCATCAAT CACGGAGTTC TAACAATCCA GGGGGTTCGC AAAACCATGT CGGTCGATGG 
CACGGTTTGT ATCAAGAAAC ACAAGTTCTC ACGACGCTAC GCTATCGATA CGAACGTAGT 
GGATGTTGCG CGAGTCGACG CAAACTTGTC GCATGGTGTC TTGGCGATCC GTGCGCCAAA 
GAAGTCTGGA TCCCAGCACG TTCGAATTGA TGAGGCGGAC GAACAGACTC GCAACACCAC 
CGGGAATCTT TCGTCGAGGG AGATCAACGT CACTACCAGC AACCACGAAC TAATGTCCAA 
TCTCACCCCC GTGGATACCG CTAGATTGGC TGCTTCACAA GTACCCTTGG CAGTACAGCA 
AGGATCTGAA GTAAATGCCC TTCCCGCAGA TCCTACCACG ATTCCAAACG GAAAAGACTC 
GGACAGTTCC AGTCATGGAG AAGTGAGCTC CGATTCGTGC TCCCAGAGAG AGGATGGTCA 
ATCATAGAGC AGCAGGATCA CTAAATTTAG CATTTATTCC TTTTCAGTAG C 

 

Protein sequence

MPYYPYTTIA SQQTHHPSQS GRLARQDFLR QLNPINNQRS FRRISASLRL TVDIPGVFAR 
DLEVAINHGV LTIQGVRKTM SVDGTVCIKK HKFSRRYAID TNVVDVARVD ANLSHGVLAI 
RAPKKSGSQH VRIDEADEQT RNTTGNLSSR EINVTTSNHE LMSNLTPVDT ARLAASQVPL 
AVQQGSEVNA LPADPTTIPN GKDSDSSSHG EVSSDSCSQR EDGQS